Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01486 ATGTGTGGCGGTGCCATCATCGCTGACTTCATACCCCGCCGTGGCCCCCGTCGCCTCGCCGCCTCCGAGCTCTGGCCAAATTCCTTCGGAAAGGACGATGACTTCGGCTTTGATTATTCCCATATCGCTAATCGACAACCCTCCACTCCCAAAACGGGCCAACCTCCCAAAGTTGGTGAGCAAGTTGAGACTAAGCCAGTGAAAAGGCAGAGGAAGAATCTCTACAGAGGGATTCGGCAGCGTCCTTGGGGAAAATGGGCTGCGGAGATTCGCGATCCTAGAAAAGGAGTTCGTGTCTGGCTGGGCACCTTCAACACTGCGGAAGAAGCTGCAAGGGCCTATGATCGTGAAGCTCGAAAAATCCGCGGCAAAAAAGCTAAGGTGAATTTCCCTAACGAGGACGATGAATATTCCATTCAAGCTCGTAATCCAACTCCACCCCTTCCTTTCGCACCCCAAAACCCTTCCTTGTATCAAGAACAGTCCCGTTGTGATCTCAATAATGCCCCTAGAAATCTCAACTTCGAGTTTGGTTATGATCTGAACCATGCTGGGCCATTTTCGTCCCACGTGGACTCTGTCAATGCTGACTCGGTTGTTGTGTCCGGCGACGAAAATTCAGGGTTAGCGTCGGGTTCAGAGGGTGCTTATTCGACGAGCGAGTTCATGGGATCTTGTCAGAATGTGAACGGTTATTTTAGTGGGACAGTGATGGAGAAGGAGAAACAGATAGAGGCGATTGAAACTCAAGAGGAAAAGAACAAAGTGCAGGAGCTTTCTGAGGAACTGATGGCATACGAAAATTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCTACGCCACCGAATAATGTTCAGGAAAGTGTTGTCGGGGATCTCTGGAGTTTCGATTGA 903 0.4939 MCGGAIIADFIPRRGPRRLAASELWPNSFGKDDDFGFDYSHIANRQPSTPKTGQPPKVGEQVETKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDEYSIQARNPTPPLPFAPQNPSLYQEQSRCDLNNAPRNLNFEFGYDLNHAGPFSSHVDSVNADSVVVSGDENSGLASGSEGAYSTSEFMGSCQNVNGYFSGTVMEKEKQIEAIETQEEKNKVQELSEELMAYENYMKFYQIPYYDGQSTPPNNVQESVVGDLWSFD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01486 300 Gene3D AP2/ERF domain 74 132 IPR036955 GO:0003700|GO:0006355
Spst7g01486 300 CDD AP2 75 132 IPR001471 GO:0003700|GO:0006355
Spst7g01486 300 FunFam Ethylene-responsive transcription factor 2 73 132 - -
Spst7g01486 300 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Spst7g01486 300 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Spst7g01486 300 PANTHER DNA-BINDING DOMAIN 55 239 IPR044808 GO:0003700|GO:0009873
Spst7g01486 300 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
Spst7g01486 300 Coils Coil 249 269 - -
Spst7g01486 300 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Spst7g01486 300 Pfam AP2 domain 75 123 IPR001471 GO:0003700|GO:0006355
Spst7g01486 300 SUPERFAMILY DNA-binding domain 74 132 IPR016177 GO:0003677
Spst7g01486 300 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01486 Spst-Chr7 66247471 66248472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01486 1 132 AP2-EREBP Transcription Factor Family AT3G16770 57.246 2.60e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst7g01486 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01486 K09286 - gmx:100819416 516.924