Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01476 ATGGCTCTTAAGAACACATCTGTCCTTATATTCTCTCTTTCCTGTTTGCTTTCCTTCTCTGTCTTGGCATCATTCTCCATCCCAGATACCAGTTCACCCTCCATCATTCCACCCGAAACCATTTGCGGATCCACCGTAGACCCTACTTATTGCAAAACCGTGCTTGCCAATCAAAATGGCAATATCTTCGACTATGGTCGCATTTCTTTCCAAAAGTCCTTGGTACAGGCCCGTAAGTTCTTTTACTTGGTGGATTCGTATCTTCAAGGTAGCTCGTATTTGTCTCAATACACTATTGGTGCTCTTGAAGACTGTCGATACCTTGCTGAACAAAATTTTGAATACTTATCAAACATTTATGCCACTGCAAGCCAAGCTAGTGGTGTTCTTCCCATTTCTCAAGCTGAAGATTTTGAAACCTATCTCAGTGCTGTCTTGACTAACCAACAAACATGTTTAGAAGGGCTACAGAGTACAACTTCAGATGCAAGAGTGAAGGATGACGTATTGCCATCCCTATCTGATGATACGAAGCTTCACAGTGTCACTTTGGCTTTGTTTGTAAAGGGTTGGGTGCCTGAGAAGAAAATCATGACATCATGGCCCCAAAATGGAAGAAATTTGAATTTCAAAAATGGTCGCCTCCCATTGACCATGTCAGACCGAGCACGTGCTATTTATGATTCTGCTAGCCACCATGGGAGGAAACTACTACAAACAGATAAAAGTGATGAAAGTGTTGTGGTTAGTAACATCGTGGTTGTGAGTCAAGATGGAACCGGAGACTTTACCACTATCAACGATGCAATAGCAGCTGCACCGGACAATAGTTCTGCTGATAATGGCTACTTCCTTGTTTTAATCACGGAGGGAGTGTACCAAGAATATGTATCCATTGACAAAAACAAGAAGTATTTGATGCTAGTTGGATATGGAATCAATCGTACAATCATCACGGGGAATCACAGTGTTGGAGATAATTTTACAACATTCAACTCAGCGACAGTAGCTGTGGTTGCTCAAGGTTTTGTAGCAGTTAACATAACATTCCGTAACACTGCTGGACCAAGCAAGGGTCAAGCAGTGGCAGTAAGAAGTGGAGCAGATATGTCCACCTTCTATAGCTGCAGCTTTGAAGGGTATCAAGATACATTGTATACACATTCTCTGAGGCAATTTTACCGAGAATGCGACATATATGGCACCGTTGACTACATATTTGGTAACGCTGCTGTTGTTTTGCAAAACTGCAACATATATTCTCGCCTCCCTCTCAGTGGACAATTCAACACGATCACAGCTCAAGGTAGAACTGACCCGAATCAAAACACAGGCACTTCCATACAGAATGCCACCATCAAAGCTGCTGATGATTTGGCTCCTAACGTTGGCACGGTGCAAACCTACCTTGGGAGACCATGGAAGCAATATTCAAGGACAGTCATCATGCAGTCCTTTATGGACAGTTTGATAGACCCTGCTGGTTGGCATGAATGGAGTGGCGATTTTGCATTGAGTACCTTGTACTATGCAGAATATGACAACACAGGACCTGCTTCTAACACTACGAACCGAGTGACTTGGCCGGGTTATCACGTTATCAGTGCCACAGATGCAACCAATTTCACCGTCTCAAACTTCTTGTACGGGGATAATTGGATTCCTCAAACTGGTGTCCCATACTTGAGTGGGTTATAG 1698 0.4323 MALKNTSVLIFSLSCLLSFSVLASFSIPDTSSPSIIPPETICGSTVDPTYCKTVLANQNGNIFDYGRISFQKSLVQARKFFYLVDSYLQGSSYLSQYTIGALEDCRYLAEQNFEYLSNIYATASQASGVLPISQAEDFETYLSAVLTNQQTCLEGLQSTTSDARVKDDVLPSLSDDTKLHSVTLALFVKGWVPEKKIMTSWPQNGRNLNFKNGRLPLTMSDRARAIYDSASHHGRKLLQTDKSDESVVVSNIVVVSQDGTGDFTTINDAIAAAPDNSSADNGYFLVLITEGVYQEYVSIDKNKKYLMLVGYGINRTIITGNHSVGDNFTTFNSATVAVVAQGFVAVNITFRNTAGPSKGQAVAVRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDYIFGNAAVVLQNCNIYSRLPLSGQFNTITAQGRTDPNQNTGTSIQNATIKAADDLAPNVGTVQTYLGRPWKQYSRTVIMQSFMDSLIDPAGWHEWSGDFALSTLYYAEYDNTGPASNTTNRVTWPGYHVISATDATNFTVSNFLYGDNWIPQTGVPYLSGL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01476 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Spst7g01476 565 PANTHER PECTINESTERASE 22 555 - -
Spst7g01476 565 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Spst7g01476 565 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Spst7g01476 565 SUPERFAMILY Pectin lyase-like 248 564 IPR011050 -
Spst7g01476 565 Gene3D - 250 565 IPR012334 -
Spst7g01476 565 SMART PMEI_2 33 186 IPR006501 GO:0004857
Spst7g01476 565 CDD PMEI-like_3 40 187 - -
Spst7g01476 565 Pfam Plant invertase/pectin methylesterase inhibitor 39 185 IPR006501 GO:0004857
Spst7g01476 565 FunFam Pectinesterase 39 189 - -
Spst7g01476 565 FunFam Pectinesterase 246 565 - -
Spst7g01476 565 Pfam Pectinesterase 253 551 IPR000070 GO:0030599|GO:0042545
Spst7g01476 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01476 Spst-Chr7 65720186 65722098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01476 7 565 Carbohydrate Esterase AT4G02330 56.326 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01476 K01051 - gmx:100786124 829.32