Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01470 ATGGCCAACAAGTTAAGCAATTCCATCCCAACAACATCAACATTTCTTATCCTCCTCCTACCCTTGTTTTTCTTCGCCCTAGTTTTCGCAGACACCCCTCCAACCTCTTCTGTCTCTCCCGGAACCATATGCAAATCCACCCCAGACCCTTCTTATTGCAAATCCATGCTCCCTCCCCAAAACGCCAACGTTTATGACTATGGCCGATTCTCAGTGAGAAAGTCTCTTTCACAGGCCACCGATTTCTTGAACTTGGTTAACAGATACCTCCAACGCCGCTCTTCTCTTTCAACCTCCGGAATCCACGCTCTCCAAGATTGCCAAACCCTCGCCGAACTCAACGTCGACTTTCTCTCCAGTTCCTTCCAAACGGTGAACAGAACAACCAGGTTCCTTCCCACTTCACAAGCTGACGACATCCAAACCCTTCTCAGCGCCATTCTAACCAACCAACAAACCTGCTTGGAAGGTCTCCAAGCCACCGCCTCCGCTTGGCGCGGACTCTTCCTCCCGCTTTCCAACGACACCAAGCTCTACAGCGTCTCTCTCGCACTCTTCACCAAGGGCTGGGTCCCCACCAACGCTAACGTCACCGCCTTTAAACCACACGCTAAACACCGCGGCTTTCGAAACGGGCGTTTGCCGCTCAAGATGTCCAGCAGAACACGCGCGATCTACGAGTCCGTTAGTCTTAGAAAGCTCCTCCAGGCGAATGTGGGTGACGAGGTGAAGGTAAAGGACATTGTCACCGTGAGCAAAGATGGTAGCGGGAACTTCACCACCTTGAACGACGCCATTGCGGCGGCGCCGAACAAGTCTTCCTCTACATCGGGGTACTTCCTGATCTACGTCACCGCTGGTGTTTACGAGGAAAACGTGTCAATTGACAAGAAGAAGACATACTTGATGATTGTTGGAGATGGCATCAACAAGACAATTATTACAGGGAATCGCAGTGTGGTTGATGGATGGACAACGTTCAAGTCGGCAACCTTTGCGGTGGTTGGAGCAGGTTTTGTAGGGGTCAACATGACTATACGAAACACTGCTGGAGCAGAGAAGCACCAAGCCGTAGCACTCCGTAACGGCGCAGATTTATCAACGTTCTACAGTTGCAGTTTGGAGGGGTACCAAGACACGCTCTATGCGCATTCCCTGCGACAATTCTACAGGGAATGCGACATCTACGGCACCGTCGATTTCATATTCGGAAACGCCGCCACAGTGTTCCAAAACTGCAACCTCTATCCTCGTCTTCCAATGAGTGGCCAATTCAACGCCATAACCGCACAAGGCCGAACCGACCCCAACCAAAACACTGGCATTTCCATCCACAACTGTACGATTACACCAGCCGACGATTTGGCTGCGAACCTAAACGCCGCTGAAACTTATCTGGGAAGGCCTTGGAAAAATTACTCAAGGACAGTTTACATGCAGAGTTTCATGGACAGTGTGATCAATGCTGCTGGTTGGCGTGAATGGGACGGTGATTTTGCTTTGACCACTTTGTACTATGCAGAGTTTAACAACACTGGACCTGGATCTACCACCGCCAACAGAGTCACGTGGCCTGGTTATAACATGATTAATGCCACCGATGCTGCTAATTTTACCGTCTTTAACTTCTTGCTCGGAGATAACTGGCTTCCCCAGACCGGAGTGCCTTACGCCAGTAACTTCGTATAG 1689 0.505 MANKLSNSIPTTSTFLILLLPLFFFALVFADTPPTSSVSPGTICKSTPDPSYCKSMLPPQNANVYDYGRFSVRKSLSQATDFLNLVNRYLQRRSSLSTSGIHALQDCQTLAELNVDFLSSSFQTVNRTTRFLPTSQADDIQTLLSAILTNQQTCLEGLQATASAWRGLFLPLSNDTKLYSVSLALFTKGWVPTNANVTAFKPHAKHRGFRNGRLPLKMSSRTRAIYESVSLRKLLQANVGDEVKVKDIVTVSKDGSGNFTTLNDAIAAAPNKSSSTSGYFLIYVTAGVYEENVSIDKKKTYLMIVGDGINKTIITGNRSVVDGWTTFKSATFAVVGAGFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSLEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAATVFQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIHNCTITPADDLAANLNAAETYLGRPWKNYSRTVYMQSFMDSVINAAGWREWDGDFALTTLYYAEFNNTGPGSTTANRVTWPGYNMINATDAANFTVFNFLLGDNWLPQTGVPYASNFV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01470 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 188 IPR035513 -
Spst7g01470 562 FunFam Pectinesterase 242 561 - -
Spst7g01470 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 188 IPR035513 -
Spst7g01470 562 SUPERFAMILY Pectin lyase-like 246 558 IPR011050 -
Spst7g01470 562 SMART PMEI_2 35 185 IPR006501 GO:0004857
Spst7g01470 562 Pfam Plant invertase/pectin methylesterase inhibitor 42 185 IPR006501 GO:0004857
Spst7g01470 562 Gene3D - 242 561 IPR012334 -
Spst7g01470 562 NCBIfam pectinesterase inhibitor domain 15 162 IPR006501 GO:0004857
Spst7g01470 562 FunFam Pectinesterase 41 188 - -
Spst7g01470 562 PANTHER PECTINESTERASE 28 551 - -
Spst7g01470 562 Pfam Pectinesterase 249 547 IPR000070 GO:0030599|GO:0042545
Spst7g01470 562 CDD PMEI-like_3 42 190 - -
Spst7g01470 562 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01470 Spst-Chr7 65559583 65563402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01470 15 562 Carbohydrate Esterase AT4G02330 62.963 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01470 K01051 - gmx:100790729 969.533