Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01445 ATGAGCGGAGCTAAGGGTAAGAAGAAGGGAGCGAGCTTCGTGATCGATTGTGCGAAGCCGGTGGAGGACAAGATTATGGACATTGCTTCTCTAGAGAAGTTTCTTCAGGAGAGGATTAAGGTCGGCGGCAAGGCCGGTGCACTCGGTGATTCCGTTACCGTCACTCGGGACAAGAACAAGATCACTGTCTCCTCTGACAGCAACTTCTCTAAAAGGTATCTGAAATATTTAACCAAGAAGTATTTGAAAAAGCACAACGTGAGGGATTGGCTTCGGGTGATTGCATCCAACAAGGACAGGAATGTCTATGAGTTGAGATACTTCAACATAGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.4694 MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKNKITVSSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01445 119 Gene3D - 1 119 IPR038526 -
Spst7g01445 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Spst7g01445 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Spst7g01445 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01445 Spst-Chr7 63235494 63236642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01445 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.931 1.20e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01445 K02891 - pop:7455994 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01445 7 63235494 63236642 Spst7g01445 7 63235494 63236642 ECH
Spst10g00027 10 310100 310652 Spst7g01445 7 63235494 63236642 ECH