Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01411 ATGGACAACATAGTTCTCCCCAAAGGATGGAGTGATTGGGGTGACCAAAAGCGTGACTCGAGGGTATATTATGGAGAATACATGTGTAGTGGACCAGGAGCTAACTTGGCTGGAAGAGTGCCATGGGCACGGGTGCTTACGGATGAAGAGGCCAAGCCTTTCATTGGGACCCAGTTCATTGAAGGGGACACTTGGCTCATTAGTCCCTAA 210 0.5 MDNIVLPKGWSDWGDQKRDSRVYYGEYMCSGPGANLAGRVPWARVLTDEEAKPFIGTQFIEGDTWLISP 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01411 69 SUPERFAMILY Pectin lyase-like 1 66 IPR011050 -
Spst7g01411 69 Pfam Pectinesterase 1 63 IPR000070 GO:0030599|GO:0042545
Spst7g01411 69 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 66 - -
Spst7g01411 69 Gene3D - 1 68 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01411 Spst-Chr7 61007210 61007522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01411 1 66 Carbohydrate Esterase AT1G05310 42.424 9.15e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01411 K01051 - gmx:102665411 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01411 7 61007210 61007522 Spst7g01411 7 61007210 61007522 ECH