Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01410 ATGGAGACTATCAGTGTTCAGGTGATGAGAAGCTTATCAGATAGTGAATCATCTGCTACATCTGGAGGTGAAGAAGAGGTGCTAATTAAGAAAGGACCATGGACTGAAGAAGAAGATTCTCTTCTCATCAACTATGTCAACCTCCATGGCGAAGGCCACTGGAATTCCCTCGCTCTCTCTGCAGGTCTGAAGAGAACGGGCAAAAGCTGCAGATTACGATGGTTGAACTACTTGCGTCCAAATGTTCGACGTGGGAACATCACCCTTCAAGAACAGCTCTTGATTCTCGAACTCCATTCCCGATGGGGCAACCGGTGGGCTAAAATAGCAGAACAGTTGCCTGGGAGAACAGACAATGAGATAAAGAACTATTGGAGGACGAGAGTGGTGAAGCTAGCTAAACAACTCAAATGTGATGTAAACAGCAAACAGTTTAGGGATGCTGTGCGCTTTGTTTGGATGCCACGCCTTGTGGAGCAGATTCAGGCTTCTTCTGGGCATGCTTCTTCTTCCTATGGACATGACCAAACTACACTGTGCAACATTCAAACCCGCAGTGAATCTAGTGGGGCCAATCCCATGAAGTTTCGTGACAGCTTAATGGTTTCCACGTACTCATCAGGGGTTGATGTTCCGCCTCCTTCTCTCTCTGACACAAGTACAACTTCAACTTTCAATTTAATGGGAGATGGTAGCTGTTCATCGGATAGTGCAGAAATGGGGTGGGAGCAGTGGGACTACTCTGATCTCCAAGCATTTGCACCGACCCATGGTTTTGGTGATGCAGACTTGTGGACCGATGAAAACATGTGGTTTTTGCACCAGCATCTTACTAATGATTTTTGA 846 0.4634 METISVQVMRSLSDSESSATSGGEEEVLIKKGPWTEEEDSLLINYVNLHGEGHWNSLALSAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILELHSRWGNRWAKIAEQLPGRTDNEIKNYWRTRVVKLAKQLKCDVNSKQFRDAVRFVWMPRLVEQIQASSGHASSSYGHDQTTLCNIQTRSESSGANPMKFRDSLMVSTYSSGVDVPPPSLSDTSTTSTFNLMGDGSCSSDSAEMGWEQWDYSDLQAFAPTHGFGDADLWTDENMWFLHQHLTNDF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01410 281 FunFam MYB transcription factor 88 151 - -
Spst7g01410 281 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Spst7g01410 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 133 IPR017930 -
Spst7g01410 281 Gene3D - 29 84 - -
Spst7g01410 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 82 IPR017930 -
Spst7g01410 281 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 29 196 IPR044676 GO:0003700|GO:0006355|GO:0043565
Spst7g01410 281 FunFam Myb transcription factor 31 83 - -
Spst7g01410 281 ProSiteProfiles Myb-like domain profile. 30 78 IPR001005 -
Spst7g01410 281 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Spst7g01410 281 Pfam Myb-like DNA-binding domain 84 127 IPR001005 -
Spst7g01410 281 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Spst7g01410 281 SMART sant 30 80 IPR001005 -
Spst7g01410 281 SMART sant 83 131 IPR001005 -
Spst7g01410 281 CDD SANT 33 78 IPR001005 -
Spst7g01410 281 Gene3D - 88 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01410 Spst-Chr7 60944126 60945217 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01410 24 280 MYB Transcription Factor Family AT2G47190 49.231 1.84e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst7g01410 Myb_DNA-binding 2.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01410 K09422 - gmx:778040 386.341