Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01391 ATGAGAAGACATGAAATATGGAGTGGTAGCGGTAATAACGAGAAAGGGGGGAAAGAGTGTTTGTGTAGCGGTCACACGTGGAAGGCATGTGGTGATGATAGGGAAGAAACTGTTGCAGAGAAGGTTAGGAAAGCAAAGGCATCTTTTGTAAATGTTTTTGGGTCCTCCTTCCACAACGTAAAGAGCGAGGGACACGCAGTGTGTGTAACTGGCCCCACCACTATGTGCCTGGTCTCTGTAGTTGACTTGGTGGTCATGCGGATTGTGCTTAATTGGAAGCATGGTTGCGTGGGGTTGCTATTTTTGGGACTGTTGGGGTGTTTGGGATTTTTGGTTGTGACCATGGAGGCTAGATTTGGTGCTGAGGCTTATCGTTTTTATGGTGTGGGGAAGAGGTCCTCGGATTGGGATTTGAATGATTGGAGATGGGATGGGGATCTGTTCATGGCCAGCCGGTTGAATCCAGTGCCAGCGGATGGTGTGGGAGTGGCGGGACAGCAATTTTTCCCTCTTGGGTCTGGGATCCCGGTGGCCGGAGGACCCTCCAACAGTTCTTCCAGCTCTGAGGAAGTAGATCCTAGGGATCCCAAGGGGAACAAGGAAGGGGACAAGAAAAGAAGAGTTATTGTGCTAGAGGATGATGGTTTGAATGAGGAAGCGGGTACACTTAGTTTAAAGCTTGGCGGGCATGCTTCTGCAGTAGTGGATAGGGAAGTTGCGAACTGGGATGGTATGAATGGGAAGAAGAGTAGAGTGTCTGGAAGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGACTGCGGTGCTGATCTGAGCAAAGCTAAGGATTATCACAGACGACATAAAGTTTGTGAGATGCACTCCAAGGCCAGTAGGGCACTTGTGGGAAATGCAATGCAGAGATTCTGTCAACAATGTAGTAGGTTTCACATGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGCAGAAGACGCCTGGCAGGACATAACAAACGAAGAAGGAAAACAAATCATGAAGCTGTTCCTAATGGAAGTTCATTAAATGATGACCAGACTAGTAGCTATCTGTTGATTAGTTTATTGAAGATAATTTCAAATATGCATTCTGACAGGTCAGATCAGACAACAGATCAGGATCTACTAACTCATATTCTGAGGAGTCTTGCTAGTCAGAATGGTGAGCAAGGGGGCAAGAACATTTCTAACCTTTTGCGAGAACCAGAGAATTTGTTGAGAGAAGGGGGTTCATCAAGGAAGTCAGACATGGTGTCAACTTTGTTCTCCAATGGTTCTCAAGGCTCTCCAACTGTTACAAGACAACAGGAAGCTGTGTCCATGGCTAAACTGCAGCAACAAGTGATGCATGCACATGATGCTAGGGCCTCTGGTCAGCAAGCTACGTCTTCTATAAAGCCCAGCATGTCAAACAGTCCTCCAGCCTACTCAGAAGCCAGAGACAGTACCGTTGGACAGATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGTATGGAAGATCTAGAAAGATTGCCTGTCTCTACAAATCTTGTGACTAGCTCTCTCGATTACCCATGGGCACAACAAGATTCGCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCTGATTCTGCGTCTGCCCAGTCTCCTTCTAGTTCCAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTTAAGCTCTTCGGTAAAGAGCCAAATGATTTTCCTCTTTTACTTAAAGCACAGATTCTTGACTGGTTATCTCATAGTCCTACTGACATGGAGAGCTATATTCGGCCGGGTTGTATTGTTTTGACCATTTATCTGCGTCAGGCTGAGCCTTTGTGGGAGGAACTTTGCTATGATCTGACTTCCAGTTTGAATAGGCTGTTGGATGTCTCAGATGACACTTTTTGGAGAAATGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCCTTCATTTTTAATGGTCAAGTTGTCATAGATACCTCCTTACCTTTCAGAAGTAACAACTATAGCAAGATTTTGACTGTTAGTCCAATTGCTGTACCAGCATCAAAGAGAGCTCAATTTTCTGTTAAGGGTGTCAACCTGTTACGCCCTGCCACTAGGTTAATGTGTGCTTTAGAAGGAAAATATCTGGTCTGTGAAGATGCTAATATGTCAATGGATCAATGTTCCAAAGAGCCTGATGAACTTCAGTGCATCCAGTTTTCATGTTCTGTCCCTGTGATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCATTGTTGTGGAAGAGGATGTTTGCTCAGAAATCTGTACACTTGAGCCCCTTCTGGAAATAAGTGAAACTGACCCAGAAGTTGAAGGAACTGGAAAAGTTAAAGCCAAAAATCAAGCCATGGATTTTATTCATGAAATGGGTTGGCTTCTTCACAGAAGCCAGTTGAAATTAAGGATGGTTCAGTTGAGCTCTAGTGTTGATCTCTTTCCATTGAAACGGTTCAAGTGGCTTATTGAGTTTTCCATTGATCATGATTGGTGTGCAGCAGTGAAAAAACTGCTGAACCTACTGCTTGATGGAACGGTAAATACAGGAGATCATCCATCCCTGTATCTTGCACTTTCAGAGATGGGACTCCTTCACAAAGCTGTTAGGAGAAATAGCAAGCAGTTAGTGGAGTTGCTTTTGAGATATGTTCCTGAGAATGTTTCTGATCATTTAGGAGCGGAAGTCAAGGCTCTAGTTGATGGAGAGAATCAGACCTTCTTGTTTAGACCTGATGTCGTTGGTCCTGCTGGTTTGACACCACTCCATATAGCAGCTGGGAAAGACGGTTCTGAGGATGTCCTTGATGCTTTAACTAATGATCCGTGCATGGTGGGAATTGAAGCATGGAAAAATGCTCGTGACAGCACAGGCTCCACACCTGAGGATTATGCACGTTTACGTGGCCATTATGCTTACATTCACTTGGTGCAGAAGAAAATTAACAAGAGACAAGGAGCATCTCATGTGGTGGTTGAGATTCCAAGTAACACGACAGAGAGCAATACAAACCAGAAGCAAAATGAGTCATCCACTAGCTTTGAAATTGGAAAGGCTGCAGCAAGGCTTAGCCAAGGGCACTGTAAACTCTGTGACAGTAAAATTTCTTGCCGAACTGCAGTAGGCAGGTCTTTAGTCTACAGACCTGCAATGCTCTCAATGGTAGCCATAGCTGCAGTCTGTGTCTGCGTGGCCCTTCTGTTTAAGAGCTCTCCCGAAGTAATATGTATGTTCCGACCCTTCAGGTGGGAAACGTTGGACTTTGGAACAAGCTAA 3360 0.4461 MRRHEIWSGSGNNEKGGKECLCSGHTWKACGDDREETVAEKVRKAKASFVNVFGSSFHNVKSEGHAVCVTGPTTMCLVSVVDLVVMRIVLNWKHGCVGLLFLGLLGCLGFLVVTMEARFGAEAYRFYGVGKRSSDWDLNDWRWDGDLFMASRLNPVPADGVGVAGQQFFPLGSGIPVAGGPSNSSSSSEEVDPRDPKGNKEGDKKRRVIVLEDDGLNEEAGTLSLKLGGHASAVVDREVANWDGMNGKKSRVSGSTSNRAVCQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNHEAVPNGSSLNDDQTSSYLLISLLKIISNMHSDRSDQTTDQDLLTHILRSLASQNGEQGGKNISNLLREPENLLREGGSSRKSDMVSTLFSNGSQGSPTVTRQQEAVSMAKLQQQVMHAHDARASGQQATSSIKPSMSNSPPAYSEARDSTVGQIKMNNFDLNDIYIDSDDGMEDLERLPVSTNLVTSSLDYPWAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLLLKAQILDWLSHSPTDMESYIRPGCIVLTIYLRQAEPLWEELCYDLTSSLNRLLDVSDDTFWRNGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPASKRAQFSVKGVNLLRPATRLMCALEGKYLVCEDANMSMDQCSKEPDELQCIQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVVEEDVCSEICTLEPLLEISETDPEVEGTGKVKAKNQAMDFIHEMGWLLHRSQLKLRMVQLSSSVDLFPLKRFKWLIEFSIDHDWCAAVKKLLNLLLDGTVNTGDHPSLYLALSEMGLLHKAVRRNSKQLVELLLRYVPENVSDHLGAEVKALVDGENQTFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYAYIHLVQKKINKRQGASHVVVEIPSNTTESNTNQKQNESSTSFEIGKAAARLSQGHCKLCDSKISCRTAVGRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVICMFRPFRWETLDFGTS 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01391 1119 ProSiteProfiles Zinc finger SBP-type profile. 259 336 IPR004333 GO:0003677
Spst7g01391 1119 MobiDBLite consensus disorder prediction 327 348 - -
Spst7g01391 1119 MobiDBLite consensus disorder prediction 190 207 - -
Spst7g01391 1119 MobiDBLite consensus disorder prediction 454 486 - -
Spst7g01391 1119 MobiDBLite consensus disorder prediction 457 486 - -
Spst7g01391 1119 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 181 1006 IPR044817 GO:0003677
Spst7g01391 1119 SUPERFAMILY SBT domain 260 340 IPR036893 GO:0003677|GO:0005634
Spst7g01391 1119 Gene3D - 252 323 IPR036893 GO:0003677|GO:0005634
Spst7g01391 1119 MobiDBLite consensus disorder prediction 179 207 - -
Spst7g01391 1119 Pfam SBP domain 262 335 IPR004333 GO:0003677
Spst7g01391 1119 SUPERFAMILY Ankyrin repeat 890 1005 IPR036770 -
Spst7g01391 1119 FunFam Squamosa promoter-binding-like protein 14 253 323 - -
Spst7g01391 1119 MobiDBLite consensus disorder prediction 532 565 - -
Spst7g01391 1119 Gene3D - 861 1020 IPR036770 -
Spst7g01391 1119 MobiDBLite consensus disorder prediction 418 437 - -
Spst7g01391 1119 MobiDBLite consensus disorder prediction 412 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01391 Spst-Chr7 60229200 60237518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01391 115 1119 SBP-box Gene Family AT3G60030 54.386 0.0 973
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Spst7g01391 SBP 2.6e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01391 7 60229200 60237518 Spst7g01391 7 60229200 60237518 ECH