Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01388 ATGAACGGAAAAGTAGTTGTCTCTGGTGTTTCCCTCATCCTTGTGGTGGGTGTTGCCATCGGTGTTGTGGTTGTGGTTAACAAAAATGACTCTGATCCTCACATAGCTTCTCAACAGAAGTCTGTGAAGGCAATGTGCGAAGGCACCGATGAGCCTCAGCTTTGTCACGAAACTCTCAGCAGTGTGAAAGGCGAAAGCGCCTCAGACCCAAAGGTTTACATACAAGCAGGAGTGGAAGCAACGATGAAAAGCGTGATCAAAGCTTTGAACATGAGTGATAGGCTCAGAGTGGAGCATGGAGACCGCGACCCTGGCATAAAAATGGCTCTGGATGATTGCAAAGACTTGATAGAATTCGCGTTGGACAGCATCGAGTCCTCGGCTAACTTGGTTAATGACCAGAACCTTCAAGCGCTGCATGACCAATCCCCAGACTTCAGGAACTGGTTGAGTGCTATAATCGCGTACCAGGATTCATGCATGGACGGGTTTAACAACGAGACAAACGGCGAGGAAGAGATTAAGAAAAAATTGAGTGAAGATGGTTTGGACCATATGGGAAAGCTCACGGGCATAGTCCTTGACATTGTGACAAACTTGTCCAAAATCCTTGAGAGTTTTGACCTGAAGTTGCAGCCGACCCCCGGTTCTCGTCGTCTTCTAGAGGTGAAAAATGCAGGACTCCCTTCGTGGCTCTCTGCTGCAGATCGGAGGCTCCTTGCTAGAGTGGGGAAAAGGGCAGCAGCCGCACCAAACGTAGTGGTTGCCAAGGATGGTAGTGGTAAATTTAAAACCATTAAGGAAGCTATTGACTCCTACCCTAAAGATCTCAAAGGCAGATATGTTATTTATGTTAAGGCTGGGGTGTACAACGAGTACATCATCATTCCTAAGAAATCAGCCAATATTCTCATTTATGGTGATGGCCCTACAAGGACCATTGTTACTGGTCGCAAAAACTTTGTAGATGGCGTCAAGACAATGCAAACTGCTACCTTCGCCAACACTGCACCAGGATTCATCGCAAAGTCAATGGCATTTGAGAACACCGCTGGATCGAGCAAGCACCAGGCAGTGGCATTCAGAAACCAAGGAGACATGTCAGCAATCTTCGACTGCGCAATGCACGGTTACCAAGACACATTGTATGTCCACGCGAACCGTCAATTCTACCGCAACTGCGAAATCTCAGGCACCATCGACTTCATCTTCGGAGCATCTGCTGCTTTGATCCAGAACTCCAAAATCATCGTGAGGTTGCCAGACCGTATCCAGTTCAACACAGTGACAGCTGACGGAAGGAGTAAGAAGAACATGGCCACAGGGATCGTGCTCCAGAACTGCGAGATAGTGCCAGAAAGGGCTCTGTACCCTACTAGGTTTCAAGTTAAATCGTACTTGGGGAGGCCGTGGAAGCAATATTCAACAACAGTGATTATGGAATCCAGCATAGGTGACTTTATTCAGCCAGAAGGGTGGGCCGTTTGGAGTGGGAACCTTTATCTTAACACCTTGTACTATGCTGAGTATGCTAACAGTGGACCTGGTTCCAATCTTCAGAAAAGGGTCAAGTGGAAGGGTTACCATGGAAGTATTCAAAAACCGGAAGCCACAAAATTCACTGCTGCCCAATTCCTCAAAGGTGGACCTTCCGGAAATGCTGATGATTGGTTGAAGGCTACGGGGGTTCCTTACACGGTTGGATTCATCAAACAAAAATGA 1722 0.4739 MNGKVVVSGVSLILVVGVAIGVVVVVNKNDSDPHIASQQKSVKAMCEGTDEPQLCHETLSSVKGESASDPKVYIQAGVEATMKSVIKALNMSDRLRVEHGDRDPGIKMALDDCKDLIEFALDSIESSANLVNDQNLQALHDQSPDFRNWLSAIIAYQDSCMDGFNNETNGEEEIKKKLSEDGLDHMGKLTGIVLDIVTNLSKILESFDLKLQPTPGSRRLLEVKNAGLPSWLSAADRRLLARVGKRAAAAPNVVVAKDGSGKFKTIKEAIDSYPKDLKGRYVIYVKAGVYNEYIIIPKKSANILIYGDGPTRTIVTGRKNFVDGVKTMQTATFANTAPGFIAKSMAFENTAGSSKHQAVAFRNQGDMSAIFDCAMHGYQDTLYVHANRQFYRNCEISGTIDFIFGASAALIQNSKIIVRLPDRIQFNTVTADGRSKKNMATGIVLQNCEIVPERALYPTRFQVKSYLGRPWKQYSTTVIMESSIGDFIQPEGWAVWSGNLYLNTLYYAEYANSGPGSNLQKRVKWKGYHGSIQKPEATKFTAAQFLKGGPSGNADDWLKATGVPYTVGFIKQK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01388 573 PANTHER PECTINESTERASE 18 559 - -
Spst7g01388 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 202 IPR035513 -
Spst7g01388 573 FunFam Pectinesterase 38 201 - -
Spst7g01388 573 Pfam Plant invertase/pectin methylesterase inhibitor 41 196 IPR006501 GO:0004857
Spst7g01388 573 CDD PMEI-like_3 44 202 - -
Spst7g01388 573 Pfam Pectinesterase 252 548 IPR000070 GO:0030599|GO:0042545
Spst7g01388 573 SUPERFAMILY Pectin lyase-like 247 567 IPR011050 -
Spst7g01388 573 SMART PMEI_2 37 196 IPR006501 GO:0004857
Spst7g01388 573 Gene3D - 246 569 IPR012334 -
Spst7g01388 573 NCBIfam pectinesterase inhibitor domain 22 199 IPR006501 GO:0004857
Spst7g01388 573 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Spst7g01388 573 FunFam Pectinesterase 246 569 - -
Spst7g01388 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01388 Spst-Chr7 60147308 60149313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01388 1 569 Carbohydrate Esterase AT2G47030 41.215 4.70e-146 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01388 K01051 - gmx:100789650 910.598