Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01376 ATGAGTGGGAAAATAATCGGTGCCGGCGTTTCTCTCATCCTTTGTGTGGGTGTGGTCATTGGCGTGGTTGCTGTAGTTCAGAGCCCGAAGAACGAGACGAGCAGCACAGGACAATTAAAAACCACGAACAGGGCCGTGACAGCGTTGTGCCAAAACACAGATGACCAACAATTTTGCCACAGTGTGCTTTCCACCACAAACAGCTCAGACCCTAAGGATTACATTGCCACCGTTGTGAAAACCTCGATGGACAGTGTCATCAAAGCGTTCAACATGAGCGACAGGCTCACAGTGGAACACGGCAACAGCAGCGCAGGAATGAAGATGGCTCTCGACGATTGCAAGGACTTGTTGCAATCCGCAATCCACGAATTGGAGGCTTCGGGTGTGTTGGTCCAAGAGAGCAACATCGACGCCGTTAACAACCACAGCTCCGAAATTAAGAACTGGCTAGGTGCTGTTGTTGCCTACCAGCAATCGTGCCTCGACGGGTTCAACACGGACGGCGAGAAGAAGGTTCAGGAACAGTTACAGTCCGATAGCTTGGACCAAGTTGGGAAGCTCACTGGCTTGGCACTTGATATCGTGTCGGGGATTGCGAAGATTCTTCAATCCTTGGACTTGAACTTGGCTCTGAAACCCGCCTCTCGTCGCCTTCTCGAGATTGATCAAGAGGGATACCCCACTTGGTTCTCCGCTGCTGATCGCAAGCTCTTGAATAACATTGATAACGGTGGAGTTATACCCCATGCTACAGTGGCTAAGGATGGCAGTGGCCAATTCACTACCATTTTGGACGCTATCAACTCCTATCCCAAGAAACACCAAGGTAGATTCATCATCTACGTCAAGGCTGGTGTCTATGATGATGTATATGGCGATGGCCCCACCAAGACCATCATAACCGGACGCAAAAACTACGCCGAGGGTACCAAGACCATGAGAACCGCTACCTTCTCCACCGTTGCTGAAGATTTCATGGCGAAGTCTATTGCATTCGAGAACACCGCCGGAGCAGAAGGACACCAAGCAGTGGCTCTTCGCGTGCAGGGTGATCGTTCAGTGTTTTTTGATTGTGCAATGCGCGGTTACCAAGATACATTGTACGTACACGCCCACCGTCAGTTCTACCGTAACTGCGAAATTTCTGGAACAATCGACTTCATCTTCGGCTACGCTACCACCTTGATCCAGAACTCGAAGATCTTGGTGAGGAAGCCAGGCGTGAACCAACAGAACATAGTGGTGGCAGATGGAACACAGCAGAAGAACATGCCCACAGGAATTGTCCTCCAGAACTGTGAGATCATGCCCGACCCTTCACTGGCCGCTGATCGCTTGACCGTGAAGACATACCTTGCCAGGCCATGGAAGGCATTCTCCAGGGCAGTGTTCATTGAGAATGTGATCGGTGACTTGATCCAGCCAGTGGGATACATTCCTTGGAACGATCTTGAGCCCAACACCCAGGACTGTTACTTCGCTGAGTACGGCAACAGTGGACCAGGTTCCGTTGCTACATCAAGGGCACCCTTTGCAAAAGGTATCATCAGCAGGGAAGAGGCTGCCAAATACACTGCTGAGCCCTGGCTCCAAGCTAGCGCCTGGTTGCCTGCCGCTTCCGTTCCTTTTGACTCCAGCTTTACCAAAGCTTAA 1656 0.5115 MSGKIIGAGVSLILCVGVVIGVVAVVQSPKNETSSTGQLKTTNRAVTALCQNTDDQQFCHSVLSTTNSSDPKDYIATVVKTSMDSVIKAFNMSDRLTVEHGNSSAGMKMALDDCKDLLQSAIHELEASGVLVQESNIDAVNNHSSEIKNWLGAVVAYQQSCLDGFNTDGEKKVQEQLQSDSLDQVGKLTGLALDIVSGIAKILQSLDLNLALKPASRRLLEIDQEGYPTWFSAADRKLLNNIDNGGVIPHATVAKDGSGQFTTILDAINSYPKKHQGRFIIYVKAGVYDDVYGDGPTKTIITGRKNYAEGTKTMRTATFSTVAEDFMAKSIAFENTAGAEGHQAVALRVQGDRSVFFDCAMRGYQDTLYVHAHRQFYRNCEISGTIDFIFGYATTLIQNSKILVRKPGVNQQNIVVADGTQQKNMPTGIVLQNCEIMPDPSLAADRLTVKTYLARPWKAFSRAVFIENVIGDLIQPVGYIPWNDLEPNTQDCYFAEYGNSGPGSVATSRAPFAKGIISREEAAKYTAEPWLQASAWLPAASVPFDSSFTKA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01376 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
Spst7g01376 551 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
Spst7g01376 551 CDD PMEI-like_3 48 201 - -
Spst7g01376 551 Pfam Pectinesterase 251 533 IPR000070 GO:0030599|GO:0042545
Spst7g01376 551 NCBIfam pectinesterase inhibitor domain 31 179 IPR006501 GO:0004857
Spst7g01376 551 SMART PMEI_2 41 195 IPR006501 GO:0004857
Spst7g01376 551 FunFam Pectinesterase 4 247 548 - -
Spst7g01376 551 Gene3D - 247 550 IPR012334 -
Spst7g01376 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Spst7g01376 551 FunFam Pectinesterase 42 200 - -
Spst7g01376 551 SUPERFAMILY Pectin lyase-like 251 545 IPR011050 -
Spst7g01376 551 PANTHER PECTINESTERASE 20 538 - -
Spst7g01376 551 Pfam Plant invertase/pectin methylesterase inhibitor 45 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01376 Spst-Chr7 59652985 59657154 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01376 3 543 Carbohydrate Esterase AT3G62170 39.116 5.56e-126 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01376 K01051 - gmx:100808559 927.932