Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01371 ATGAGTGGGAAAATAATCGGTGCCGGCGTTTCTCTCATCCTTTGTGTGGGTGTGGTCATTGGCGTGGTTGCTGTAGTTCAGAGCCCGAAGAACGAGACGAGCAGCACAGGACAATTAAAAACCACGAACAGGGCCGTGACGGCGTTGTGCCAAAACTCAGATGACCAACAATTTTGCCACAGTGTGCTTTCCACCACAAACAGCTCAGACCCTAAGGATTACATTGCCACCGTTGTGAAAACCTCGATGGACAGTGTCATCAAAGCGTTCAACATGAGCGACAGGCTCACAGTCGAACACGGCAACAGCAGCGCAGGAATGAAGATGGCTCTCGACGATTGCAAGGACTTGTTGCAATCCGCAATCCACGAATTGGAGGCTTCGGGTGTGTTGGTCCAAGAGAGCAACATCGACGCCGTTAACAACCACAGCTCCGAAATTAAGAACTGGCTAGGTGCTGTTGTTGCCTACCAGCAATCGTGCCTCGACGGGTTCAACACGGACGGCGAGAAGAAGGTTCAGGAACAGTTACAGTCCGATAGCTTGGACCAAGTTGGGAAGCTCACTGGCTTGGCACTTGATATCGTGTCGGGGATTGCGAAGATTCTTCAATCCTTGGACTTGAACTTGGCTCTGAAACCCGCCTCTCGTCGCCTTCTCGAGATTGATCAAGAGGGATACCCCACTTGGTTCTCCGCTGCTGATCGCAAGCTCTTGAATAACATTGATAACGGTGGAGTTATACCCCATGCTACAGTGGCTAAGGATGGCAGTGGCCAATTCACTACCATTTTGGACGCTATCAACTCCTATCCCAAGAAACACCAAGGTAGATTCATCATCTACGTCAAGGCTGGTGTCTATGATGAGTACATCCTTGTTGACAAGAAGAAGGTTAACCTTCTTATATATGGCGATGGCCCCACCAAGACCATCATAACCGGACGCAAAAACTACGCCGAGGGTACCAAGACCATGAGAACCGCTACCTTCTCCACCGTTGCTGAAGATTTCATGGCGAAGTCTATTGCATTCGAGAACACCGCCGGAGCAGAAGGACACCAAGCAGTGGCTCTTCGCGTGCAGGGTGATCGTTCAGTGTTTTTTGATTGTGCAATGCGTGGTTACCAAGATACATTGTACGTACACGCCCACCGTCAGTTCTACCGTAACTGCGAAATTTCTGGAACAATCGACTTCATCTTCGGCTACGCTACCACCTTGATCCAGAACTCGAAGATCTTGGTGAGGAAGCCAGGCGTGAACCAACAGAACATAGTGGTGGCAGATGGAACACAGCAGAAGAACATGCCCACAGGAATTGTCCTCCAGAACTGTGAGATCATGCCCGACCCTTCACTGGCCGCTGATCGCTTGACCGTGAAGACATACCTTGCCAGGCCATGGAAGGCATTCTCCAGGGCAGTGTTCATTGAGAATGTGATCGGTGACTTGATCCAGCCAGTGGGATACATTCCTTGGAACGATCTTGAGCCCAACACCCAGGACTGTTACTTCGCTGAGTACGGCAACAGTGGACCAGGTTCCGTTGCTACATCAAGGGCACCCTTTGCAAAAGGTATCATCAGCAGGGAAGAGGCTGCCAAATACACTGCTGAGCCCTGGCTCCAAGCTAGCGCCTGGTTGCCTGCCGCTTCCGTTCCTTTTGACTCCAGCTTTACCAAAGCTTAA 1692 0.5083 MSGKIIGAGVSLILCVGVVIGVVAVVQSPKNETSSTGQLKTTNRAVTALCQNSDDQQFCHSVLSTTNSSDPKDYIATVVKTSMDSVIKAFNMSDRLTVEHGNSSAGMKMALDDCKDLLQSAIHELEASGVLVQESNIDAVNNHSSEIKNWLGAVVAYQQSCLDGFNTDGEKKVQEQLQSDSLDQVGKLTGLALDIVSGIAKILQSLDLNLALKPASRRLLEIDQEGYPTWFSAADRKLLNNIDNGGVIPHATVAKDGSGQFTTILDAINSYPKKHQGRFIIYVKAGVYDEYILVDKKKVNLLIYGDGPTKTIITGRKNYAEGTKTMRTATFSTVAEDFMAKSIAFENTAGAEGHQAVALRVQGDRSVFFDCAMRGYQDTLYVHAHRQFYRNCEISGTIDFIFGYATTLIQNSKILVRKPGVNQQNIVVADGTQQKNMPTGIVLQNCEIMPDPSLAADRLTVKTYLARPWKAFSRAVFIENVIGDLIQPVGYIPWNDLEPNTQDCYFAEYGNSGPGSVATSRAPFAKGIISREEAAKYTAEPWLQASAWLPAASVPFDSSFTKA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01371 563 PANTHER PECTINESTERASE 20 550 - -
Spst7g01371 563 Pfam Plant invertase/pectin methylesterase inhibitor 45 195 IPR006501 GO:0004857
Spst7g01371 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
Spst7g01371 563 CDD PMEI-like_3 48 201 - -
Spst7g01371 563 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Spst7g01371 563 SUPERFAMILY Pectin lyase-like 251 557 IPR011050 -
Spst7g01371 563 SMART PMEI_2 41 195 IPR006501 GO:0004857
Spst7g01371 563 FunFam Pectinesterase 245 560 - -
Spst7g01371 563 FunFam Pectinesterase 42 200 - -
Spst7g01371 563 NCBIfam pectinesterase inhibitor domain 31 179 IPR006501 GO:0004857
Spst7g01371 563 Gene3D - 247 562 IPR012334 -
Spst7g01371 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Spst7g01371 563 Pfam Pectinesterase 251 545 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01371 Spst-Chr7 58772949 58774747 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01371 3 555 Carbohydrate Esterase AT3G62170 39.796 2.29e-132 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01371 K01051 - gmx:100808559 956.051