Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01367 ATGAGTGGAAAAGTAATCGGTGCCGGCGTTTCTCTCATCCTTTGTGTGGGTGTGGTCATTGGCGTGGTTGCTGTAGTTCAGAGCCCGAAGAACGAGACAAGCAGCACAGGAGAATTAAAAACCACGAACAGGGCCGTGACAGCGTTGTGCCAAAACTCAGATGACCAAAAATATTGCCACAGTGTGCTTTCCACTACAAACAGCTCAGATCCTAAGGATTACATTACTACCGTGGTGAAAAACTCAATGGACACTGTCATCAAAGCATTCAACATGAGCGACAGGCTCACCGTGGAACACGGCAACAGCAGCGAAGGAATGAAGATGGCTCTCGACGACTGCAAGGACTTGTTGCAATCCGCAATCCACGAACTGGAGGCCTCGGGTGTGTTGGTCCAAGAGAGCAACATCGACGCCGTTAACAACCACACCTCCGAAATCAAGAACTGGCTAGGTGCTGTTGTTGCCTACCAGCAATCGTGCCTCGACGGGTTCAACACGGACGGCGAGAAGAAGGTTCAGGAACAGTTACAGTCCGATAGCTTGGACGAAGTTGGAAAGCTCACTGGCTTGGCACTTGACATCGTGTCGGGGATTGCGAAGATTCTTCAATCCTTGGACTTGAACTTGGCTGTGAAACCTGCCTCTCGTCGCCTTCTCGAGATTGATCAAGAGGGTTACCCCACTTGGGTCGCCGCTGCTGATCGCAAGCTCTTGGCTAATATTGGTAACAGCAAAGGTGGAGTTACACCCCATGCTACAGTGGCTAAGGATGGCAGTGGCCAATTCAAAACCGTTTTGGACGCTATCAACTCCTATCCCAAGAAACACCAAGGTAGATTCATCATCTACGTCAAGGCTGGTGTCTATGACGAGTACATCGTTGTTGACAAGAAGAAGGTTAACCTTCTCATCTATGGCGATGGCCCCACGAAGACCATCATCACCGGACGCAAAAACTTCGCCGAGGCCACCGTTGCTGAAGATTTCATGGCGAAGTCTATTGCATTCGAGAACACCGCCGGAGCAGCAGGACACCAAGCAGTGGCTCTTCGCGTGCAGGGTGATCGTTCAGTCTTTTTTGATTGTGCAATGCGCGGTTACCAAGACACATTGTACGTACACGCCCACCGTCAGTTCTACCGTAACTGCGAAATCTCTGGAACAATCGACTTCATCTTCGGCTACGCTACCACCTTGATCCAGAACTCAAAGATCTTGGTGAGGAAGCCAGGCGCAAACCAACAGAACATAGTGGTGGCAGATGGAACACAGCAGAAGAACATGCCAACAGGAATTGTCCTCCAGAAATGTGAGATCATGCCCGACCCTACATTGTCCCCTGAACGCTTGACCGTGAAGACATACCTTGCCAGGCCATGGAAGGCCTTCTCCAGGGCAGTATTCATTGAGAATGTGATCGGTGACTTGGTCCAGCCAGTGGGATACATTCCTTGGAACGATGTTGAGCCCAACACCAAGGACTGTCACTTCATTGAGTATGGCAACAGTGGACCAGGTTCCGATGCTAAATCAAGGGCATCCTTTGCAAAAGGTATCGTCAGCAAGGAAGAGGCTGCCAAATACACTGCTGAGCACTGGCTTCAAGCCAGCACCTGGTTGCCTGCCACTTCCGTTCCTTTTGACCCCAGCTTTATCAAAGCTTAA 1668 0.5048 MSGKVIGAGVSLILCVGVVIGVVAVVQSPKNETSSTGELKTTNRAVTALCQNSDDQKYCHSVLSTTNSSDPKDYITTVVKNSMDTVIKAFNMSDRLTVEHGNSSEGMKMALDDCKDLLQSAIHELEASGVLVQESNIDAVNNHTSEIKNWLGAVVAYQQSCLDGFNTDGEKKVQEQLQSDSLDEVGKLTGLALDIVSGIAKILQSLDLNLAVKPASRRLLEIDQEGYPTWVAAADRKLLANIGNSKGGVTPHATVAKDGSGQFKTVLDAINSYPKKHQGRFIIYVKAGVYDEYIVVDKKKVNLLIYGDGPTKTIITGRKNFAEATVAEDFMAKSIAFENTAGAAGHQAVALRVQGDRSVFFDCAMRGYQDTLYVHAHRQFYRNCEISGTIDFIFGYATTLIQNSKILVRKPGANQQNIVVADGTQQKNMPTGIVLQKCEIMPDPTLSPERLTVKTYLARPWKAFSRAVFIENVIGDLVQPVGYIPWNDVEPNTKDCHFIEYGNSGPGSDAKSRASFAKGIVSKEEAAKYTAEHWLQASTWLPATSVPFDPSFIKA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01367 555 FunFam Pectinesterase 4 249 552 - -
Spst7g01367 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Spst7g01367 555 CDD PMEI-like_3 48 201 - -
Spst7g01367 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
Spst7g01367 555 SUPERFAMILY Pectin lyase-like 251 549 IPR011050 -
Spst7g01367 555 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Spst7g01367 555 Pfam Pectinesterase 253 537 IPR000070 GO:0030599|GO:0042545
Spst7g01367 555 SMART PMEI_2 41 195 IPR006501 GO:0004857
Spst7g01367 555 FunFam Pectinesterase 42 200 - -
Spst7g01367 555 NCBIfam pectinesterase inhibitor domain 32 179 IPR006501 GO:0004857
Spst7g01367 555 Pfam Plant invertase/pectin methylesterase inhibitor 45 195 IPR006501 GO:0004857
Spst7g01367 555 Gene3D - 247 552 IPR012334 -
Spst7g01367 555 PANTHER PECTINESTERASE 20 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01367 Spst-Chr7 54817712 54819500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01367 1 547 Carbohydrate Esterase AT2G47030 40.034 2.24e-132 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01367 K01051 - gmx:100808559 902.123