Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01361 ATGGCGAAGTCTATTGCATTCGAGAACACCGCCGGAGCAGCAGGACACCAAGCAGTGGCTCTTCGTGTGCAGGGTGATCGTTCAGTCTTTTTTGATTGTGCAATGCGCGGTTACCAAGACACATTGTACGTACACGCCCACCGTCAGTTCTACCGTAATTGCGAAATCTCTGGAACAATCGACTTCATCTTCGGCTACGCTACCACCTTGATCCAGAACTCGAAGATCTTGGTGAGGAAGCCAGGTGTAAACCAGCAGAACATAGTGGTGGCAGATGGAACACAGCAGAAGAACATGCCAACAGGAATTGTTCTCCAGAACTGTGATATCATGCCCGACCCCACATTGTCCCCTGATCGCTTGACCGTGAAGACATACCTTGCCAGGCCATGGAAGGCATTCTCCAGGGCAGTGTTCATTGAGAATGTGATCGGTGACTTGATCCAGCCTGAGGGCTACATTCCTTGGAACGATCTTGAGCCTAATACCAAGTACTGTTACTTCGTTGAGTATGGCAACAGTGGACCAGGTTCAAATGCTAAATCAAGGGCATCCTTTGCAAAAGGTATCATCAGCAGGGAAGAGGCTGCCAAATACACCGCTGAGCCCTGGCTCCAAGCTAGCACCTGGTTGCCTGCCACTTCCGTTCCTTTTGACCCCAGCTTTACCAAAGCTAAAGTTTAA 684 0.4985 MAKSIAFENTAGAAGHQAVALRVQGDRSVFFDCAMRGYQDTLYVHAHRQFYRNCEISGTIDFIFGYATTLIQNSKILVRKPGVNQQNIVVADGTQQKNMPTGIVLQNCDIMPDPTLSPDRLTVKTYLARPWKAFSRAVFIENVIGDLIQPEGYIPWNDLEPNTKYCYFVEYGNSGPGSNAKSRASFAKGIISREEAAKYTAEPWLQASTWLPATSVPFDPSFTKAKV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01361 227 PANTHER PECTINESTERASE 1 214 - -
Spst7g01361 227 ProSitePatterns Pectinesterase signature 2. 56 65 IPR033131 -
Spst7g01361 227 Pfam Pectinesterase 1 207 IPR000070 GO:0030599|GO:0042545
Spst7g01361 227 SUPERFAMILY Pectin lyase-like 2 219 IPR011050 -
Spst7g01361 227 Gene3D - 1 222 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01361 Spst-Chr7 54265278 54265961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01361 1 217 Carbohydrate Esterase AT2G47030 53.670 2.84e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01361 K01051 - gmx:100808559 405.601