Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01360 ATGAGTGGGAAAATAATTGGTGCCGGCGTTTCTCTGATCCTTTGTGTGGGTGTGGTCATTGGCGTGGTTGCTGTAGTTCAGAGCCCGAAGAACGAGACGAGCATAACAGGAGAAGTAAAAACCACGAACAGGGCCGTGACAGCGTTGTGCCAAAACTCAGATGACCAAAAATATTGCCACGGTGTGCTTTCCACCACAAACAGCTCAGACCCTAAGGATTACATTGCCAGCGTGGTGAAAGCCTCGATGGACAGTGTCATCAAAGCGTTCAACATGAGCGACAGGCTGACAGTGGAACACGGCAACAGCAGCGAAGGAATGAAGATGGCTCTCGACGATTGCAAGGACTTGTTGCAATCCGCAATCCACGAACTGGAGGCCTCGGGTGTATTGGTCCAAGAGAGCAACATCGACGCCGTTAACAACCACACCTCCGAAATCAAGAATTGGCTAGGTGCTGTTGTTGCCTACCAGCAATCGTGCCTCGACGGGTTCAACACCGACGGCGAGAAGAAGGTTCAGGAACAGTTACAGTCCGATAGCTTGGACCAAGTTGGAAAGCTCACTGGCTTGGCACTTGATATGGTGTCGGGGATTTCGAAGATTCTTCAATCCTTGGACTTGAACTTGGCTCTGAAACCTGCCTCTCGTCGTCGCCTTCTCGAGATTGATCAAGAAGGATACCCAACTTGGGTCTCCGCTGCTGATCGTAAGCTCTTGGCTAATATTGGTAACAGCAAAGGTGGAGTTACACCCCATGCTACAGTGGCTAAGGATGGCAGTGGCCAATTCAAAACAATTTTGGACGCTATCAACTCCTACCCGAAGAATCACCAAGGTAGATTCATCATCTACGTCAAGGCTGGTGTCTATGACGAGTACATCCTTGTTGACAAGAAAAAGATGAACCTTCTCATCTATGGCGATGGCCCCACCAAGACCATCATCACCGGACGCAAAAACTTCGCCGAGGGTACCAAGACCATGAGAACCTCTACCTTCTGTAAGTCCAACTTCTTCTCCTTCCATCCAAACAAGTAA 1041 0.4947 MSGKIIGAGVSLILCVGVVIGVVAVVQSPKNETSITGEVKTTNRAVTALCQNSDDQKYCHGVLSTTNSSDPKDYIASVVKASMDSVIKAFNMSDRLTVEHGNSSEGMKMALDDCKDLLQSAIHELEASGVLVQESNIDAVNNHTSEIKNWLGAVVAYQQSCLDGFNTDGEKKVQEQLQSDSLDQVGKLTGLALDMVSGISKILQSLDLNLALKPASRRRLLEIDQEGYPTWVSAADRKLLANIGNSKGGVTPHATVAKDGSGQFKTILDAINSYPKNHQGRFIIYVKAGVYDEYILVDKKKMNLLIYGDGPTKTIITGRKNFAEGTKTMRTSTFCKSNFFSFHPNK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01360 346 Pfam Pectinesterase 254 336 IPR000070 GO:0030599|GO:0042545
Spst7g01360 346 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Spst7g01360 346 FunFam Pectinesterase 42 200 - -
Spst7g01360 346 SMART PMEI_2 41 195 IPR006501 GO:0004857
Spst7g01360 346 NCBIfam pectinesterase inhibitor domain 32 177 IPR006501 GO:0004857
Spst7g01360 346 CDD PMEI-like_3 48 201 - -
Spst7g01360 346 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 198 IPR035513 -
Spst7g01360 346 Pfam Plant invertase/pectin methylesterase inhibitor 45 195 IPR006501 GO:0004857
Spst7g01360 346 PANTHER PECTINESTERASE 20 335 - -
Spst7g01360 346 SUPERFAMILY Pectin lyase-like 252 335 IPR011050 -
Spst7g01360 346 Gene3D - 248 342 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01360 Spst-Chr7 54264150 54265190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01360 1 333 Carbohydrate Esterase AT2G47030 33.423 1.00e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01360 K01051 - gmx:100808559 515.383