Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01354 ATGAGTGGGAAAATAATCGGTGCCGGCGTTTCTCTCATCCTTTGTGTGGGTGTGGTCATTGGCGTGGTTGCTGTGGTTCAGAGCCCGAAGAACGAGACGAGCAGCACAGGAGAATTAAAAACCACGAACAGGGCCGTGACAGCGTTGTGCCAAAACTCAGATGATCAACAATTTTGCCACAGTGTGCTTTCCACCACAAAGAGCTCAAACCCTAAGGATTACATTGCCACCGTTGTGAAAACCTCGATGGACAGTGTCATCAAAGCGTTCAACATGAGCGACAGGCTCACAGTGGAACACGGCAACAGCAGCGCAGGAATGAAGATGGCTCTCGACGATTGCAAGGACTTGTTGCAATCCGCAATCCACGAACTGGAGGCCTCGGGTGTGTTGGTCCAAGAGAGCAACATCGACGCCGTTAACAACCACACCTCCGAAATCAAGAACTGGCTAGGTGCTGTTGTTGCCTATCAGCAATCGTGCCTCGACGGGTTCAACACGGACGGCGAGAAGAAGGTTCAGGAACAGTTACAGTCCAATAGCTTGGACCAAGTTGGGAAGCTCACTGGCTTGGCACTTGATATCGTATCGGGGATTGCGAAGATTCTTCAATCCTTGGACTTGAACTTGATTCTGAAACCCGCCTCTCGTCGCCTTCTCGATATTGATCAAGAGGGATACCCCACTTGGTTCTCCGCTGCTGATCGCAAGCTCTTGGATAATATTGATAACGGTGGAGTTATACCCCATGCTACAGTGGCTAAGGATGGCAGTGGCCAATTCACTACCATTTTGGACGCTATCAACTCCTATCCCAAGAAACATCAAGGTAGATTCATCATCTACGTCAAGGCTGGTGTGTATGATGAGTACATCCTTGTTGACAAGAAGAAGGTTAACCTTCTCATCTATGGCGATGGCCCCACCAAGACCATCATCACCGGACGCAAAAACTACGCCGAGGGTACCAAGACCATGAGAACCGCTACCTTCTGTAAGTCCAACTTCCTCTCCTTCCATCCAAACAAGAACATATTTGCCTAA 1044 0.4933 MSGKIIGAGVSLILCVGVVIGVVAVVQSPKNETSSTGELKTTNRAVTALCQNSDDQQFCHSVLSTTKSSNPKDYIATVVKTSMDSVIKAFNMSDRLTVEHGNSSAGMKMALDDCKDLLQSAIHELEASGVLVQESNIDAVNNHTSEIKNWLGAVVAYQQSCLDGFNTDGEKKVQEQLQSNSLDQVGKLTGLALDIVSGIAKILQSLDLNLILKPASRRLLDIDQEGYPTWFSAADRKLLDNIDNGGVIPHATVAKDGSGQFTTILDAINSYPKKHQGRFIIYVKAGVYDEYILVDKKKVNLLIYGDGPTKTIITGRKNYAEGTKTMRTATFCKSNFLSFHPNKNIFA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01354 347 FunFam Pectinesterase 42 200 - -
Spst7g01354 347 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Spst7g01354 347 Pfam Plant invertase/pectin methylesterase inhibitor 45 195 IPR006501 GO:0004857
Spst7g01354 347 CDD PMEI-like_3 48 201 - -
Spst7g01354 347 Pfam Pectinesterase 251 333 IPR000070 GO:0030599|GO:0042545
Spst7g01354 347 PANTHER PECTINESTERASE 19 332 - -
Spst7g01354 347 SMART PMEI_2 41 195 IPR006501 GO:0004857
Spst7g01354 347 NCBIfam pectinesterase inhibitor domain 32 179 IPR006501 GO:0004857
Spst7g01354 347 SUPERFAMILY Pectin lyase-like 251 333 IPR011050 -
Spst7g01354 347 Gene3D - 247 340 IPR012334 -
Spst7g01354 347 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01354 Spst-Chr7 52847556 52848599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01354 43 331 Carbohydrate Esterase AT2G26450 36.860 2.04e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01354 K01051 - gmx:100808559 526.939