Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01336 ATGAAAAATCTTGGTTCCATCTACAGACTGTTACTGACCTTTTCATGTGAGAAAGCATTTTGCGCTTGCATTGTTTCTAGGTTGGTTGATAAAATTAATAATTCTATTGGTCAAGACCCTGAATCAAAATCCTTAACTAGTGTGCTGGATATTTATGGCTTTGAGAGTTTCAAGCTAACAGAAGGCTTTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGAAACCTGGTGGCATTATCGCTCTTCCGGATGAAGCTTGTATGTTTCCTAGATCTACACATGAAACTTTTGCCCAAAAGCTTTACCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCTAAATTATCACGTAGTGACTTTACAATTTGCCATTATGCTGGAGATGTCACTTATCAAACTGAATTTTTCCTCGACAAGAACAAAGATTATGTTGTTGCAGAGCACCAGGCACTTCTTTATGCTTCAAAATGCCCCATTGTATCAGGTTTATTTCCTCCTTCTCCCGAGGAATCTTCAAAACAATCAAAGTTCTCTTCCATTGGCTCACGATTTAAG 582 0.3677 MKNLGSIYRLLLTFSCEKAFCACIVSRLVDKINNSIGQDPESKSLTSVLDIYGFESFKLTEGFFEQFCINLTNEKLQQHFNQKPGGIIALPDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTEFFLDKNKDYVVAEHQALLYASKCPIVSGLFPPSPEESSKQSKFSSIGSRFK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01336 194 Gene3D - 57 82 - -
Spst7g01336 194 ProSiteProfiles Myosin motor domain profile. 1 194 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01336 194 SMART MYSc_2a 2 194 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01336 194 Gene3D - 83 194 - -
Spst7g01336 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 193 IPR027417 -
Spst7g01336 194 Pfam Myosin head (motor domain) 82 185 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01336 194 MobiDBLite consensus disorder prediction 175 194 - -
Spst7g01336 194 Gene3D Myosin VI head, motor domain, U50 subdomain 24 38 - -
Spst7g01336 194 Gene3D Kinesin motor domain 39 54 IPR036961 -
Spst7g01336 194 PANTHER MYOSIN 18 194 - -
Spst7g01336 194 MobiDBLite consensus disorder prediction 176 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01336 Spst-Chr7 50639040 50641627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01336 28 194 Myosins gene family AT1G04160 68.657 6.72e-85 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01336 K10357 - gmx:100795648 280.411