Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01325 ATGGAGAATTCATCGGGAAGCTATGAAAAAGAGCTTAATCTGGAGGCCACAGAGTTAAGATTGGGGCTTCCCGGTAGCGATGAACCTGAAAAACGTTCTATTGTTAGAAGCAACAAGAGATCTTCACCAGAAGCAAGTGAGGAAGAGTGCATAAGCAATGGTTCTGATGTCACAAGTGATCACCAAGACAACGTTGTGCCACCAGCGAAGGCACAAGTAGTGGGATGGCCACCGATTCGATCTTATAGGAAGAATAGTCTTCAACAAAACAAAGAAGAACAAAGTGAAGGAGCTGGGATGTTCGTGAAAGTTAGTATGGCGGGTGCACCTTACTTGAGGAAGATAGATCTCAAGGTTTACAAAAGCTACCCTGAACTTCTCAAGGCCTTGGAAAATATGTTCAAGTGCACATTTGGTGAATATTCAGAAAGGGAAGGGTACAATGGATCTGAATATGCTCCAACTTATGAAGATAAAGATGGTGACTGGATGCTGGTTGGAGACGTTCCATGGCACATGTTCGTGTCATCCTGCAAGAGGCTGAGAATTATGAAGGGATCAGAAGCAAAGGGGTTGGGTTGTTTTTGA 588 0.4388 MENSSGSYEKELNLEATELRLGLPGSDEPEKRSIVRSNKRSSPEASEEECISNGSDVTSDHQDNVVPPAKAQVVGWPPIRSYRKNSLQQNKEEQSEGAGMFVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWHMFVSSCKRLRIMKGSEAKGLGCF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01325 195 MobiDBLite consensus disorder prediction 47 62 - -
Spst7g01325 195 SUPERFAMILY CAD & PB1 domains 93 185 - -
Spst7g01325 195 Pfam AUX/IAA family 53 193 IPR033389 -
Spst7g01325 195 MobiDBLite consensus disorder prediction 24 46 - -
Spst7g01325 195 Gene3D - 93 195 - -
Spst7g01325 195 MobiDBLite consensus disorder prediction 1 64 - -
Spst7g01325 195 ProSiteProfiles PB1 domain profile. 99 186 IPR000270 GO:0005515
Spst7g01325 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 190 IPR003311 GO:0005634|GO:0006355
Spst7g01325 195 FunFam Auxin-responsive protein 94 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01325 Spst-Chr7 47421881 47422791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01325 85 192 B3 DNA Binding Superfamily AT2G46530 37.037 3.23e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Spst7g01325 AUX_IAA 8.2e-60 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01325 K14484 - gmx:100780752 367.081