Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01305 ATGAATCACCTACCGTCGAACATGATGCCGGAGGAAGGAAGCCCAGAGTGGATGAACAACGGGGACAACATGTGGCAGTTAACGGCGGGCTCTCTGGTGGGCCTGCAAAGTGTTCCGGGCCTGGTCATCCTTTACGGAAGCATAGTCAAGAAGAAATGGGCTTTGAACTCGGCGTTCATGGCCCTCTACGCTTTCGCGGCGGTTCTTGTTTGTTGGGTGGGGTGGTGCTACCAAATGTCGTTTGGTGAAAGGTTTTTTCCATTTTTGGGACGCCCAAACGTGGCCTTGGACCAGGAATTCCTTCTGCACAAAGCTTTTGCGGGGGACTTTCCCAACGCCACTATGATGTACTTTCAGCTGGTTTTTGCTGCCATCACGTTGATTCTCATCGCAGGGGCGTTGCTCGGGAGAATGAACTTCCACGCGTGGATGTTGTTTGTTCCACTCTGGGTGACTTTCTCTTACACCATTTGTGCCTTCAGTATATGGAGCACTGAGGGATGGTTGTTCAAAATGGGCCTTGTTGATTACTCCGGTGGCTTTGTCATTCACCTTTCTTCTGGGGTTGCTGGTTTCATCGCAGCATGTTGGGTAGGACCAAGGACAGTGAAGGATAGAGAGAGGTTCCCTCCAAACAACATACTTCTGATGCTGGCTGGGGCTGGCCTACTATGGATGGGGTGGAGTGGATTCAACGGTGGAGATCCATACGCATCCAGCATAGATGCATCTCTGGCCGTTCTTAACACCCACGTGTGCACGGCCATGAGTTTGTTGACTTGGCTTTTCCTTGATATCCTCTTCTTTGGAAAACCTTCGGTGATTGGTGCCACTCAAGGCATGATCACTGGTTTGGTTTGCATCACACCTGCTGCCGGTGTGGTGCAAGGATGGGCAGCAATAATAATGGGAATGATGTCGGGAAGCATCCCATGGTACACAATGATGGTCTTGCACAAACAAATTAGGCTCCTCAAACAGGTGGATGATACCATGGCAGTTTTCCACACTCATGCAGTGGCTGGTTGCTTAGGTGGGATTCTGGCTGGGTTCTTTGCTGACCCTAACCTTTGCCGTCTCTTCTATGGGGTACATGATTCGGTGCACTGTACAGGCCTTGCTTATGGCATATTCACAGGGAGGCCCAAGGCAGGGTTCAGGCAAATGGGGGTTCAGCTTCTTGGCATTGTGTTTGTGATACTTCTCAATGTCACCACAACTAGCATTGTGTGTTTGGTTGTTAAGATCATCGTTCCACTGAGGCTGCACGAAGATGAGTTGCAAGTTGGGGATGATGCAATCCATGGTGAGGTTGCATATGCATTGTGGGGCGATGGAGAGAAGCTTGAGACTGTCAATGAGACTTTGAATTTTGAGAATAATCATGAATGGCCAACTATGGAACTAAAAACTTCTAGTGATGCTCAAGTGGGATGA 1437 0.4948 MNHLPSNMMPEEGSPEWMNNGDNMWQLTAGSLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVLVCWVGWCYQMSFGERFFPFLGRPNVALDQEFLLHKAFAGDFPNATMMYFQLVFAAITLILIAGALLGRMNFHAWMLFVPLWVTFSYTICAFSIWSTEGWLFKMGLVDYSGGFVIHLSSGVAGFIAACWVGPRTVKDRERFPPNNILLMLAGAGLLWMGWSGFNGGDPYASSIDASLAVLNTHVCTAMSLLTWLFLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAIIMGMMSGSIPWYTMMVLHKQIRLLKQVDDTMAVFHTHAVAGCLGGILAGFFADPNLCRLFYGVHDSVHCTGLAYGIFTGRPKAGFRQMGVQLLGIVFVILLNVTTTSIVCLVVKIIVPLRLHEDELQVGDDAIHGEVAYALWGDGEKLETVNETLNFENNHEWPTMELKTSSDAQVG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01305 478 Gene3D Ammonium transporter AmtB like domains 5 443 IPR029020 -
Spst7g01305 478 FunFam Ammonium transporter 6 443 - -
Spst7g01305 478 NCBIfam ammonium transporter 22 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst7g01305 478 PANTHER AMMONIUM TRANSPORTER MEP2 5 451 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst7g01305 478 Pfam Ammonium Transporter Family 25 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Spst7g01305 478 SUPERFAMILY Ammonium transporter 17 422 - -
Spst7g01305 478 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005886
Spst7g01305 478 PRINTS Rhesus blood group protein signature 246 268 IPR002229 GO:0005886
Spst7g01305 478 PRINTS Rhesus blood group protein signature 215 233 IPR002229 GO:0005886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01305 Spst-Chr7 45122248 45123912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01305 113 463 Inorganic Solute Cotransporters AT2G38290 59.259 3.00e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01305 K03320 - gmx:112999382 846.269