Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01302 ATGACGACGGGTGTAGTACGCGACCAGAACCTGGAGAAACACATTCACAAGCAGATGGGATGCATGGCCGGGTTTCTTCAGATCTTCGATCGCCACCAGCTACTCACCGGAAAGCGCATCTACTCGCCCAAACGTCTCCCTCCTGCCTCACCGGAGTCCAACAAACCCACTGCTTCGCCGGTGCGTTCTGTGCAGTCTCCGGCGAGAGAGGCCGTCCAATCAGAACCCAAGGTAAGTGCTCCCGCACTCCCTGTTCTGGAATTCAAGGAAGGCACACGGTCCTCGTGGAAGTTTTCGCGAGAGGCTCCCCGCCTGTCCCTTGACAGCAGAGCCATGGTAGATGCGAAGGGGACGCTGCACCTTCACCCGCGCGAGATCCCCTCAGAAAACGACGGAGATAAACAGCGTCGTTCCACCAGTGTCATTGCGAAGCTCATGGGCCTGGAGCCTTTGCCCGATTCAGAGCCCGGGCCCGTGGCGAAGCTGCAGAGATCCGCGTCTGAGTCGAGAGTGTCCAGAGATCTGCCCCTGCCACAGTGTCGTTTCTTTGACCCAAACAATCTTTCAAGCAGGGTTCAGGTCACCAATGTGGTCCACGAGAATAATGACGCTGCCATCCATGCCCGATTGGGCAATGACAGAGCCGCAGATCCACCCAGACAGAGGGCCAAGAAGAGCTTTTACGATTCCGCTGATTTCTTCCCTGAACCTAAGCACACCGTTTCGGTATACGGAGAGATTGAACGGAGATTGCGGATGCGAGGGATTAACGAGCCTTCCAAGGATCTCCACACTCTCAAACACATCCTAGAGGCCTTGCAGCTCAAGGGGCTTTTGCATTCCAACAACAAACCCAACCACTCTCCCACTGTCGTTATGAAACCGGTTCGATCAGTTAACCGGACCGGAAACGATTCTCCTCCTCCTCCCCTCCGGTCTAGTCCTCGCCGGAGCATCCGGGTTGGGGGCGAGGGTCATAGGAATGACCAAAATGAAGGGAGTGGAAGGAGTCAAAGTGGCAGAGCGCAGAGCTCGAGTCCTAACAGGAGGAGGCAGCAACACGTAGAACCGCAGAGGAAAGTGGGTGTTGATTGGAGAAGGGGGTCTGTGTCTGTGTCTCCGGTTCATTCTCCCAAGGTGAGTCCGAGAAGGAATGCAGGCAATCAGCAGGTGCCATGTGGATCGCCTAGGATGAGAAAAAATGTTGAGCGAAAGGAGAAAATGTTGGGTGGGGCAGAGGATGAATCGACCACAGTTTCAGAGAACAGCTTCAGCACCTCTTCATATCCTGATACAGAGAGGTACAGGTTGGAAGAGTACAAGGAGGGAAAAGATCTGCTGGATAGGTGTGATAAGCTGCTGAGCAGCATAGCAGAAATAACATCAGCCAACGAGTTGCAACCGAGTCCAGTATCGGTTCTGGACTCGTCGTTTTACAAGGACGACTGGTGCTCACCATCCCCGATGACCAAACGCTGCATTGATTACAAAGATCAAGCGGCGGAGTCAGAAGATGATATGTGGAGTGCGGCTTTGTGCAGCAGCGAGGAGGCAGCGTCGGAGGATTGCGATTTCGTTTACGTATCGGAGATTCTTCGAGCGTGCAGTTACTTGCCGGAAGAGAGCGACGTTTTCCTGTTATTGGAGAAGCAGCAATGTCTGAAAGGAAAGGATACCTCAAAGGCTTCGACGCTGCAGAGGCGGTTGATTTTCGACACTCTCCAGGAGATACTAGAGCGGAACCATCAGTTGCCGCCGTGGAAGGCAGTTTCGTGCGGCGAGCCAAGGCAACAGATCTGGTCGGAGTTTCGGAGGATCCGAGAGAGGGAAGAATCAGAGTCGGAGGACTTGTTCAAGGTTATATGCGGAGTGTTGAAGAAGGACATGGCAGAGGAGATGGGGTGGGGAGAATGGGCGGTGGAGATGGGAGATGTGGTGTTAGACATTGAACGTCTCGTGTTTAAAGATCTCGTTGGCGAAACCATTCGAGAACTCGCTTTGTTTTCTCCTCAATGTAACAACCATAACCACCTACCCGCCCTTCGTAGGAAACTCCACTTTTGA 2064 0.5354 MTTGVVRDQNLEKHIHKQMGCMAGFLQIFDRHQLLTGKRIYSPKRLPPASPESNKPTASPVRSVQSPAREAVQSEPKVSAPALPVLEFKEGTRSSWKFSREAPRLSLDSRAMVDAKGTLHLHPREIPSENDGDKQRRSTSVIAKLMGLEPLPDSEPGPVAKLQRSASESRVSRDLPLPQCRFFDPNNLSSRVQVTNVVHENNDAAIHARLGNDRAADPPRQRAKKSFYDSADFFPEPKHTVSVYGEIERRLRMRGINEPSKDLHTLKHILEALQLKGLLHSNNKPNHSPTVVMKPVRSVNRTGNDSPPPPLRSSPRRSIRVGGEGHRNDQNEGSGRSQSGRAQSSSPNRRRQQHVEPQRKVGVDWRRGSVSVSPVHSPKVSPRRNAGNQQVPCGSPRMRKNVERKEKMLGGAEDESTTVSENSFSTSSYPDTERYRLEEYKEGKDLLDRCDKLLSSIAEITSANELQPSPVSVLDSSFYKDDWCSPSPMTKRCIDYKDQAAESEDDMWSAALCSSEEAASEDCDFVYVSEILRACSYLPEESDVFLLLEKQQCLKGKDTSKASTLQRRLIFDTLQEILERNHQLPPWKAVSCGEPRQQIWSEFRRIREREESESEDLFKVICGVLKKDMAEEMGWGEWAVEMGDVVLDIERLVFKDLVGETIRELALFSPQCNNHNHLPALRRKLHF 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01302 687 MobiDBLite consensus disorder prediction 415 430 - -
Spst7g01302 687 Pfam Domain of unknown function (DUF4378) 524 660 IPR025486 -
Spst7g01302 687 MobiDBLite consensus disorder prediction 332 351 - -
Spst7g01302 687 MobiDBLite consensus disorder prediction 147 172 - -
Spst7g01302 687 MobiDBLite consensus disorder prediction 42 77 - -
Spst7g01302 687 MobiDBLite consensus disorder prediction 398 412 - -
Spst7g01302 687 MobiDBLite consensus disorder prediction 374 395 - -
Spst7g01302 687 PANTHER LONGIFOLIA PROTEIN 3 60 IPR033334 GO:0051513
Spst7g01302 687 MobiDBLite consensus disorder prediction 280 430 - -
Spst7g01302 687 MobiDBLite consensus disorder prediction 280 307 - -
Spst7g01302 687 MobiDBLite consensus disorder prediction 55 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01302 Spst-Chr7 44925115 44928064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01302 372 687 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 43.252 4.52e-70 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01302 - - gmx:100777397 1090.49