Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01265 ATGGAGCAGTATGAAATTTTAGAACAGATTGGAAGAGGCTCCTTTGCTTCTGCTCTACTTGTCAGACACAGGCACGAGAACAAAAAGTATGTTCTTAAGAAGATCCGGCTTGCCCGCCAGACGGATAGAACCCGTAGATCTGCTCACCAGGAGATGGAGCTTATCTCTAAAGTTCGAAACCCATTTATCGTGGACTATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCGTCATTGGCTATTGTGAAGGAGGAGATATGACAGAAGCAATTAAAAAGGCCAATGGTGTACATTTTCCTGAAGAGAAGCTCAGTAAGTGGCTGGTTCAGCTGCTGATGGCACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTGGGTGACTTTGGTCTAGCTAAAATGTTGACATGCGATGATCTTGCATCTTCAGTTGTTGGGACTCCAAGTTATATGTGCCCTGAGCTTCTTGCTGATATACCCTATGGCTCTAAATCAGATATATGGTCTTTGGGATGCTGTGTATATGAAATGGCTGCTCACAAACCAGCTTTTAAAGCTCTTGTGAGTTTCTCTCTATGGGTGGCAATTTTTTCTTTGGATGATACGTTATCGGCAAAACTTTCTATTCGAGGACTCATTAAGAGTATGCTGCGGAAGAATCCTGAGCTTCGGCCTAGTGAAATGGTTTTCAATGATATTATATCCGTTTGGACCCTTAAAACATTTGGCACCCCCAAACTTGAGTCAAGCTCCACCACTGATCACAGCCCTCTTCGAGTTCATTTCCTTGCCCCGGATTCTGTTTCTACACTTTCTGGAAGAGATAAAAGATTGTCATTCAGCAATGACAGGGCGTTGAATCCTAGTATTTCTGGAACTGAAGTAGGATCTGTGTGTTCTACTCAAAGAGGTCAAGGATTCTCTACTTGTTCAAAAGAGAAACACTATGAACTATCTGTTGGTTGTGTTCGTGAAGAATGCAATTCGAACAAGTCAAGAGACACAAAGTCCTCAACTGTTGATAGGATGCCAAGATTGAGAACAGCCAAGGAATATGCCACTCCCCGAAGGCAGACAATACCATCAAAGATATCCAATACTGGTTCCAAGCGTGAGTTACTTCCAGCATATTCCACTCCAGGTGTGAAATTTACCGTACCAACCCGCAGAGCTTCCCTTCCTCTGCCTACCAGAACCATGGGTATGACCACCCCTTATAGGGCTAATGTTGGTCTTCTTCGAGACGTGGACTCTCCTGATATTTCTGTTAATGCCCCGCGAATTGACAAGATTGCCGAATTCCCTCTAGCATCTTGTGAGGATTCTCTCTTTCCTGTCCATGGAACTTCATCGACCTTGGCTCAGTGTTCTTCTGGTTCCCCGAAGAGTGCTGACTGTTTAATCACGAAAGACAAGTGCACAATCCAAGTTGTGGACAAAGTCAGTGTCCCTTCAAGTGTACAATCCCCAAAGAGTGCTGCTCCAGTTTCACATGGCAATGAATGCTCTGAACATGCTGTTTCAAGCCACTCCTCTGCCGAGTCTCGCCAACAAAGGTTTGACCCCTCGTCTTACCAGCAACGTGCCGAGGCATTGGAGGGTTTGCTTGAGTTCTCTGCTCGGCTTCTACAGCAACAAAGGTTTGAAGAACTTGGGGTGTTGTTGAAGCCATTCGGTCCTGAGAAGGTTTCCCCAAGAGAAACAGCTATTTGGTTGGCTAAGAGCTTCAAAGAAACTGTGGCCTAA 1803 0.4415 MEQYEILEQIGRGSFASALLVRHRHENKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVDYKDSWVEKGCFVCIVIGYCEGGDMTEAIKKANGVHFPEEKLSKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTCDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALVSFSLWVAIFSLDDTLSAKLSIRGLIKSMLRKNPELRPSEMVFNDIISVWTLKTFGTPKLESSSTTDHSPLRVHFLAPDSVSTLSGRDKRLSFSNDRALNPSISGTEVGSVCSTQRGQGFSTCSKEKHYELSVGCVREECNSNKSRDTKSSTVDRMPRLRTAKEYATPRRQTIPSKISNTGSKRELLPAYSTPGVKFTVPTRRASLPLPTRTMGMTTPYRANVGLLRDVDSPDISVNAPRIDKIAEFPLASCEDSLFPVHGTSSTLAQCSSGSPKSADCLITKDKCTIQVVDKVSVPSSVQSPKSAAPVSHGNECSEHAVSSHSSAESRQQRFDPSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLAKSFKETVA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01265 600 MobiDBLite consensus disorder prediction 503 543 - -
Spst7g01265 600 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Spst7g01265 600 CDD STKc_Nek 3 245 - -
Spst7g01265 600 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01265 600 Pfam Protein kinase domain 4 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01265 600 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01265 600 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Spst7g01265 600 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 556 - -
Spst7g01265 600 SUPERFAMILY Protein kinase-like (PK-like) 1 309 IPR011009 -
Spst7g01265 600 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Spst7g01265 600 Gene3D Transferase(Phosphotransferase) domain 1 80 269 - -
Spst7g01265 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01265 Spst-Chr7 42001074 42007225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01265 1 245 MAP Kinase Kinase Gene Family AT4G29810 29.845 5.01e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Spst7g01265 Pkinase 2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01265 K08857 - gmx:100810347 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01265 7 42001074 42007225 Spst7g01265 7 42001074 42007225 ECH
Spst1g03172 1 40203182 40205590 Spst7g01265 7 42001074 42007225 PCT