Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01263 ATGGGTAGTGTAGATTATGAGTACCCTTTGGGGATGAACATTGTTCAGGGTATGCAGCACCAAGTGGAGGTTCCACCACCTCAACCATTTTTGAAGTCTCTAAAGTACTCCCTCAAGGAAACTTTCTTTCCAGATGACCCTTTGAGGCAGTTCAAAAACAAGCCACCCTCCAAAAAGCTCATGCTTGCCCTTCAGTATTTCTTCCCCATCTTCGAATGGGCACCCAAATTCACCTTCCACTTCTTCAAAGCTGACCTCGTAGCTGGTATCACCATAGCTAGCTTGGCCATTCCCCAAGGCATCAGCTATGCCAAGCTCGCCAACCTCCCTCCTATCCTTGGACTATATTCAAGCTTTATACCACCGCTGATATATGCGATGATGGGAAGTTCGAGGGATTTGGCGGTGGGGACCGTGGCGGTTGGATCGCTTCTCATGGGTTCCATGTTGAGTGATGAGGTTAATCCCAATCAAGACCCAAACCTTTACCTACACCTTGCCTTCACAGCTACACTATTTGCTGGAATTTTTCAGGCTTCGTTGGGTTTCTTTAGGTTGGGGTTCATCGTGGATTTTCTGTCACATGCAACCATTGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGTCTGCAGCAACTAAAATCGATTCTTGGGCTTGTGCATTTCACACATGGAGCTGATATCATATCAGTTATGCGCTCTGTTTTCACCCAAACTCATGAGAGCAAAAAACAACCAAGGTTTTTCTGGGTGTCAGCAATGGCACCATTAACGTCCGTTATATTGGGAAGTCTGTTGGTTTATTTCACTCACGCCGAGAAGCACGGAGTTGAAGTTATAGGAGAACTGAAGAAGGGTTTAAATCCAGGATCTGTCACAAAGCTGGTATTTGTGTCACCTTACATGATCACAGCTGTCAAAACTGGCATTGTGGTTGGCATCATAGCGCTTGCAGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGTTCTTTTACCTCTTGCTACATCACAACAGGGCCATTTTCACGCTCAGCCGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTATAATGTCAATTGCAGTCATGTTGACATTGTTATTCCTAACACCCTTGTTCCATTACACCCCCCTGGTGGTGCTATCAGCCATAATTGTATCTGCAATGCTTGGCCTCGTAGATTATGAAGCAGCCATCCATCTGTGGAAGATTGACAAATTTGACTTTGTTGTGTGCATGAGTGCATACATTGGCGTGGTCTTTGGCAGCGTTGAAATTGGCTTAGTCATAGCTGTTGCAATATCTGTACTTCGAGTACTTCTATTCATTGCAAGGCCGAGGACATTCGTTTTGGGCAACATTCCAAATTCTGAGATTTACAGAAATGTAGAGCAATATCCAAATGCAAAACATGTTCCTGGAATCCTAATCCTAGAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGACGAAGAGGAGGACAGAATCATAGCTACTCGAGAAACAAGTTTGCAGTATATTATAATGGATATGAGTGGTGTTGGAAACATCGATACAAGTGGAATAAGTATGCTTGAAGAGGTCAAGAAGATTACGGAGAGAAGAGAGCTGCAAACATGGTTCAAATGGGTCGAAGAGTTGGAGGGGGAGAATGTTTCAATGGATTCTCACTTGAAGAGGGAGTATTGGAATTCAAGTCTCGTTTTGGTCAACCCCGGAAGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTCCAGAATAATTTAGGGCAGAAATGGATCTATCTAACTGTTGAAGAGGCCGTTGTAGCATGCAACTTCAATCTCCGTGCAAGCAAAACGAATCTCAAGAAAGATGAATCAGAGGGTTGGAACAATGTTTGA 1995 0.4361 MGSVDYEYPLGMNIVQGMQHQVEVPPPQPFLKSLKYSLKETFFPDDPLRQFKNKPPSKKLMLALQYFFPIFEWAPKFTFHFFKADLVAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDEVNPNQDPNLYLHLAFTATLFAGIFQASLGFFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQTHESKKQPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPGSVTKLVFVSPYMITAVKTGIVVGIIALAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNIVGSFTSCYITTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLVDYEAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFIARPRTFVLGNIPNSEIYRNVEQYPNAKHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIIATRETSLQYIIMDMSGVGNIDTSGISMLEEVKKITERRELQTWFKWVEELEGENVSMDSHLKREYWNSSLVLVNPGSEVMKKLNKSKFQNNLGQKWIYLTVEEAVVACNFNLRASKTNLKKDESEGWNNV 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01263 664 Pfam Sulfate permease family 82 242 IPR011547 GO:0016020
Spst7g01263 664 Pfam Sulfate permease family 245 440 IPR011547 GO:0016020
Spst7g01263 664 CDD STAS_SulP_like_sulfate_transporter 492 635 - -
Spst7g01263 664 SUPERFAMILY SpoIIaa-like 493 576 IPR036513 -
Spst7g01263 664 Gene3D STAS domain 471 645 IPR036513 -
Spst7g01263 664 ProSiteProfiles STAS domain profile. 491 642 IPR002645 -
Spst7g01263 664 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Spst7g01263 664 PANTHER SULFATE TRANSPORTER 31 645 IPR001902 GO:0016020|GO:0055085
Spst7g01263 664 Pfam STAS domain 492 576 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01263 Spst-Chr7 41907890 41914439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01263 20 664 Inorganic Solute Cotransporters AT4G02700 62.425 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01263 K17471 - gmx:100810196 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01263 7 41907890 41914439 Spst7g01263 7 41907890 41914439 ECH
Spst1g03175 1 40217337 40224660 Spst7g01263 7 41907890 41914439 PCT