Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01241 ATGAGAGAGGGGCTGAGATCGCGGACGCGGTTGGGGACGGTTTCTGGTGGCGAAGGAGTTGTTCACAAGAAAAAGGTTGTTGTGAAGAGCGAAGCTGTTGATTTGGATGGTGAGCGTTTGGAGGTGCAGAACTCAAAGATTGAGAAGAAGGATGAAGTCGAACGTGATGTGAAAGAAGAATGTGGCTTTGATTTGAACTTGAGTGCGAGTGGAGATGTTGACTTGGATGAGAATGGGAGTAGTAGGAGTTGTTTTAGTGGTGGAGGTAGTATTGTAGTTGCTGAGGTAGATAGGAAAGCAAAGAAGGAACAAGGTTCAAATAATGAAGTACTGGTTGGGGGTAGAGTGTTGCGCTCAAGGTCTAACGGGGGGAAGGATAGAAGAGTGTATTATGGAGAGAATGAGGATGTTGTTTCTGAGAATGATAGAGAATGTAGTGGGAGTGAGAGTATGAAAGTTAAGAAGGAATGTGAAGAAGCTGATGGGTTTTTGGCTGACAGTTGTGAGAATGAAAAGGCTAAGGTGAAGAAGGCAGGGAATGACAGGGGGGATTTGAAACGGAAGCGCGGGAGGCCTCCCAGAATAGATGTGAAAGTGGAAGATCAACCAGGTGATCAGTCTCCCAATATAGATTTGAAAGTAGAAGTTAAATCAGTTGATCAGTTGCCACGTAAGCGTGGGAGACCCCCTTCGGCTGGCAAAAAAAACCATGTGGTGGTGCAGAATATAAAAGGGAAGGCTGGCCTTAGAAAAAATAAAGAAGGTTTAACTATGAAACATGGTGCAAATGTGAATGCAGTTGATGATGCCAATTCAAGGAAGTCTGCTGGGGATGAGTTAGAAAAGAAGGAAATCTCTCTTGTCAAGAGCACAAAATTTAGTAAGGCTTCGGAAACTGGCAACGAAGTGGTGGCCTCGCCATTAAGATCAAATAACGATAATGCACTTGTCTCTGAGAAAAGTGGAAAGAATAAAGTAAAGCAGTTAGTGAGGGATCAAATAAAGGAAATTCTCTCTGCTGCAGGCTGGACTGTTGACTATAGACCTAGGAATGGTAGAGAATACCATGATGCAGTGTATGTTAGTCTGGACGGACATACACATTGGTCAATCACCTTGGCCTACAAGAGGCTTAAAGAGTATTATGAAGCTGGTAATGGTGAAGGTACGGCTTATAAACCAGGCTTCAAATTTACACCAATACCAGCAGAGGATTTCAAAATCCTAACTAAGGTAATTAACAAGCAAAGTAATAGGAAAGATAAATTGGTAAAAAAAGGGGTAAAGGGTGGAAAGAAAGTTGATGGAGTCAATGGTAGTAAGAACAGAGAAAAGTCAGGTGCAGCTGTGGGTAAGTCAATCAAGAGGAAAATGAAAAGGAAATGGTCACTTGTAGAAACAGATGCTACATCACCTAACAGGATGCCTGTTCTTGTGAGGGATCATAAGCGACGCAAAACGCATAACAAGCACCGATATGCTCCATTAGTTCGTAATGCTGAGGAGATAGATTCAGAAACGGAGGGATATGTACTGTACAGTGGAAAAAGAACTTTGCTTGCCTGGATGATTGATTTGGGCACAGTCCTTCTAAATGGGCAGGTTCATTATAAGCCACCTGAAGGTAAAAGTGCAATACTGGATGGTAAGATCACAGGAGATGGCATTCAGTGTGGCTGCTGTAATAAAATCATTACAATTTCAGAATTTGAAGTTCATGCCGGAAGCAAATTTGCTGATCCACTGCAAAATATATATGTGGAGGAAGGAATGTCCCTTTTACAATGCTTGCTAGATTCGTGGAATAAACAAGATGAATCTGAACGCAATGGTTTTCATTTTGTGGATGTTGCGGGTGAAGATCCAAATGATGATACTTGCGGGATCTGTGGAGATGGTGGAGACCTGATATGTTGTGATGGTTGCCCATCAACATTCCATCAGGACTGTTTGGATATAAAAGATGCTGATGATGAACTTCCTATGTCAAAATTACTCACTTGCCGACTATGTGAGCAAAAATATCACAGATCCTTTATTGAGACAAATGATTCCAATACTATTGACACCAGTGATGTGTTATTTTGCGGAAACAAATGTCAAGAGTTATCTGAGAGACTTGAAATGCTCCTTGGGGTTAAACATGAAATTGAAGATGGATATTCTTGGACTTTTATACGACGGTCAGATGTTGGCTTTGATGTTTCTATGACAAAACCTCAGACGATTGAATGTAATTCTAAGTTGGCTGTTGCATTATCAATAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGGTCAATCTGATCCACAGTATTCTGTATAATCGTGGGTCAAATTTCAATCGTCTGAGCTATAGTGGATTTGTTACTGCAGTTCTAGAGAGAGGTGATGAGATAATTGCTGCTGCATCTATCAGGATCCATGGGAATAAACTAGCAGAGATGCCATTTATTGGTACCCGCTATATGTACAGACGGCAAGGAATGTGCCGCCGGCTTCTAAAGGCCATTGAATTGGGACTTGGCTCTTTAAATGTTGAGTTATTGGTCATACCAGCTATCTCAGAACTCAGAGAAACTTGGACTTCTGTTTTTGGGTTTGAGCCACTTGAATCAACAAGCAAGCAATTAATACATAATATGAATTTGTTGGTATTTCCTCATGTAGATATGTTACAGAAGAAGATATCAAAACGTGAATTGGCTGATCAAAATCCGATTCCTTCAGAAGCTGTCAATCTTCAAAGCAATCAAATAGCAAATAATGGCAATGAAGCTGGCTCATCTGGGTGTGATCCTCCCCGCTCTAATGCATGCCAGATAAAGGATGAAACCGTATCCACTGAATCTGATTGTCATATTCCTAAGGGTTCATTGAATAATGTACCTGACATTGCTAGCAACATTGACGATGATAGGCAATCTTCAAAAGATGACACATGTCAAGTTGTATGTCAGACAGTTGACGAAAATCCGGTCATGGAAGATACTTGTTGCCTAGCTGGAGATAGTCAGTTGAACAATTGCACCGTTCCTTGTGAGGAAAGACGATGTCCCACATCTTGTATTAGCATTGAGGCTACAAAAGGGCACTGTGTTTCTTTGGAGGTTACTGAAAACTTCCCTAATTTGGTCGAAGTAGCAAATGAAGTTATGTCAAATAACAATAGTGCTGATGACTCACAAACTGCGTTTGGTACAAGAGGTTCGAAAGATTCTGCTGACTCTATTCACCAGGATTCATATATATTTTCTGACAGTTGTGGACTAAGAAGAAACAATGATTGTGGTCAACCGAACTTTATTGGAACAAAAGAAGTACATGGTGTTAGTGTTTCTGGTTGTAATTCTAGACCCAATGGTGATTGTGCCTCTGGTGATGGTGCTTCCGCAACTAACGTCTTATTGCACCTTGCATCTGAGGACATCGCCAATAACAAGCCTTGGTTGAAAGGGTCTTCTGAGCTACCTGAGCCTGATTTGCAGGTTGATCAAACTGAACGGAACACTGGTCCCTCCCAGTGGAGCCCTAACACTGCTTCTGGTGCGGCTCTTAATTGTGCAACTACTGGAAGTGCTTCGCGTGGTAGTACTGAGGGAATAGTTTTGTCAAACCAAGCCAGTTGA 3639 0.416 MREGLRSRTRLGTVSGGEGVVHKKKVVVKSEAVDLDGERLEVQNSKIEKKDEVERDVKEECGFDLNLSASGDVDLDENGSSRSCFSGGGSIVVAEVDRKAKKEQGSNNEVLVGGRVLRSRSNGGKDRRVYYGENEDVVSENDRECSGSESMKVKKECEEADGFLADSCENEKAKVKKAGNDRGDLKRKRGRPPRIDVKVEDQPGDQSPNIDLKVEVKSVDQLPRKRGRPPSAGKKNHVVVQNIKGKAGLRKNKEGLTMKHGANVNAVDDANSRKSAGDELEKKEISLVKSTKFSKASETGNEVVASPLRSNNDNALVSEKSGKNKVKQLVRDQIKEILSAAGWTVDYRPRNGREYHDAVYVSLDGHTHWSITLAYKRLKEYYEAGNGEGTAYKPGFKFTPIPAEDFKILTKVINKQSNRKDKLVKKGVKGGKKVDGVNGSKNREKSGAAVGKSIKRKMKRKWSLVETDATSPNRMPVLVRDHKRRKTHNKHRYAPLVRNAEEIDSETEGYVLYSGKRTLLAWMIDLGTVLLNGQVHYKPPEGKSAILDGKITGDGIQCGCCNKIITISEFEVHAGSKFADPLQNIYVEEGMSLLQCLLDSWNKQDESERNGFHFVDVAGEDPNDDTCGICGDGGDLICCDGCPSTFHQDCLDIKDADDELPMSKLLTCRLCEQKYHRSFIETNDSNTIDTSDVLFCGNKCQELSERLEMLLGVKHEIEDGYSWTFIRRSDVGFDVSMTKPQTIECNSKLAVALSIMDECFMPYIDHRSGVNLIHSILYNRGSNFNRLSYSGFVTAVLERGDEIIAAASIRIHGNKLAEMPFIGTRYMYRRQGMCRRLLKAIELGLGSLNVELLVIPAISELRETWTSVFGFEPLESTSKQLIHNMNLLVFPHVDMLQKKISKRELADQNPIPSEAVNLQSNQIANNGNEAGSSGCDPPRSNACQIKDETVSTESDCHIPKGSLNNVPDIASNIDDDRQSSKDDTCQVVCQTVDENPVMEDTCCLAGDSQLNNCTVPCEERRCPTSCISIEATKGHCVSLEVTENFPNLVEVANEVMSNNNSADDSQTAFGTRGSKDSADSIHQDSYIFSDSCGLRRNNDCGQPNFIGTKEVHGVSVSGCNSRPNGDCASGDGASATNVLLHLASEDIANNKPWLKGSSELPEPDLQVDQTERNTGPSQWSPNTASGAALNCATTGSASRGSTEGIVLSNQAS 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01241 1212 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 737 900 IPR000182 GO:0016747
Spst7g01241 1212 MobiDBLite consensus disorder prediction 171 201 - -
Spst7g01241 1212 CDD NAT_SF 796 842 - -
Spst7g01241 1212 MobiDBLite consensus disorder prediction 1153 1212 - -
Spst7g01241 1212 Pfam Tify domain binding domain 549 598 IPR032308 -
Spst7g01241 1212 ProSiteProfiles Zinc finger PHD-type profile. 624 674 IPR019787 -
Spst7g01241 1212 MobiDBLite consensus disorder prediction 171 209 - -
Spst7g01241 1212 MobiDBLite consensus disorder prediction 427 452 - -
Spst7g01241 1212 ProSitePatterns Zinc finger PHD-type signature. 627 671 IPR019786 -
Spst7g01241 1212 SMART PHD_3 626 672 IPR001965 -
Spst7g01241 1212 PANTHER PHD FINGER PROTEIN 12 298 1019 IPR042163 GO:0003714|GO:0045892
Spst7g01241 1212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 616 712 IPR013083 -
Spst7g01241 1212 Pfam PHD-finger 627 673 IPR019787 -
Spst7g01241 1212 SUPERFAMILY FYVE/PHD zinc finger 619 676 IPR011011 -
Spst7g01241 1212 MobiDBLite consensus disorder prediction 1163 1212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01241 Spst-Chr7 40416005 40423369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01241 185 907 PHD Transcription Factor Family AT5G36670 39.390 4.53e-174 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Spst7g01241 TDBD 9.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01241 - - gmx:100784172 1608.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01241 7 40416005 40423369 Spst7g01241 7 40416005 40423369 ECH
Spst1g03188 1 40346603 40351864 Spst7g01241 7 40416005 40423369 PCT