Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01210 ATGGTATCTTCTAAAAGATATGATGTCTTTCTAAGCTTTCGAGGTGAGGACACCCGCAAGAAATTCACAAGCCATCTTTATGATGCTTTGAAGCAAAAGAAAGTTGAGACCTTCATAGACTATCGTCTTGAAAAGGGAGAGGAAATTTCAACAACACTAATCAAAGCCATCGAAGATTCTCATATATCTATTGTCATCTTATCAGAGAACTATGCTTCCTCAAAATGGTGCTTGGGTGAATTATGTAACATTATGGAATGTAAGAAAGAGAAAGGACAAATTGTGATACCGGTGTTCTATGACGTAGATCCATCCCATGTACGGAAGCAGACTGGAAGCTATGAGCAATTCTTTGTATCACATAAGGGAGAACCCAACTGCAACAAATGGAAAGCTGCTCTCACTGAAGCATCCAATTTAGTTGCATGGGACTCTCGAGCTTACAGAGGAAAACAGATAGATCATGCAACAAACATATTGGAAGCTTTTGATTTTTCTGCAACATCTGGAATAGAAGTCCTTCTGGACAGAGCTCTAATAACAATTTCAGGTGGCGATCAACTAGAAATGCATGACTTGATACAAGAAATGGGTTGGGAAGTTGTTCATCAAGAATGTATCAAAGACCCTGGAAAACAAAGTAGGTTGTGGAAACATGAGGAAGTGTGTGATGTCTTGAAAAATAACAAGGGAACTGAAGTTGTTGAAGGCATAATTTTAAATTTGTCTAAATTAGTTGAGAATCTATTTTTGAGCTCTGATTCCCTTGCAAAGATGACTAACATGAGATTTCTTAAAATCCATGGTTGGAGCAAGTTTACAATATTTAATGTGTGCTTTCCTAATGGTCTAGATACACTGTCTCATAAAATGAGGTACCTTTACTGGGATGGATTCTGTCTTGAGTCTTTGCCATCTAACTTTTGTGCTGAACAGCTTGTAGAACTTTGCATGCGTTGTAGCAAGCTTAAAAAGCTTTGGGACGGGGTTCAGAACCTTGTGAATTTGAAGACAATTGACCTGTGGGGATCCCGAGACCTGATTGAGATTCCAGACTTATCCAAGGCAGAAAAACTTGAAAATGTTTCTCTTTGCTATTGTGAAAGCTTGTGGCAGCTCCAAGTCCATTCAAAATCTCTTCGTGTACTAAACCTTTATGGTTGCTCATCACTGAGGAAATTTTCAGTTACATCAGATGAACTGACAAAATTGAACCTAGCTTTCACTGCTATATGTTCATTACCATCATCAATTTGGCTCAAAGGGAAGCTTAAATCTCTTTACCTTAAAGGTTGTTGCAATCTCCAGGAGTTAACAGATGAACCAAGAATTTATGGTTCTCAGAAGCACTTCTCAACATTCGCATCTAATGTTGAGAGATTGTCTATGAACATCAAAAACCTTTCAACACTGACAATGCTTTGGTTAGATGATTGCAAGAAACTTGTGTCTTTGCCGAAGCTTTGGCCATCCCTTGAAAAGTTGAGTGCTAGTAATTGCATTTCTCTAGACTCATATGTCACTCAATGGCTAGTGTTACAACACATGTTACATAGCCGCATACCCTACATACGCAAACACTATCTAAAGTGTTATGATGAAGAGTATTTCTTTCCAGGAGACCATGTGATTGATGAGTGTGGATTTTGCACAACAGAGAGTTCAATAACTATTCCTTATCTTCTGAAAACTGAATTGTATGGTTTCATTTACAGCATCGTTCTATCGAAGGGATCAGTCTTGCAGAGTGATGTTTCATGTTCTGTTTATCAAGATGGCATAAGGGTTGGCTGGCTTCAAAGATTGTTGGAGTACGAAAGTTTGATTTCCAATCACGTGTTGTTTATGTATCATGACATCAACGAATTTCATATAATAACTGAACTGCATGGCCATTTCTTCTGCAACATAACATTTATATTTGAGAACAGTGGAGAAAGCATAAAAGAGATTGGCGTCTTTCCAATATATGGCTCAGGATCAGGGTTGAAGCTGGCTGACTGGCAGCAGAGAAGTTTTTGA 2022 0.3828 MVSSKRYDVFLSFRGEDTRKKFTSHLYDALKQKKVETFIDYRLEKGEEISTTLIKAIEDSHISIVILSENYASSKWCLGELCNIMECKKEKGQIVIPVFYDVDPSHVRKQTGSYEQFFVSHKGEPNCNKWKAALTEASNLVAWDSRAYRGKQIDHATNILEAFDFSATSGIEVLLDRALITISGGDQLEMHDLIQEMGWEVVHQECIKDPGKQSRLWKHEEVCDVLKNNKGTEVVEGIILNLSKLVENLFLSSDSLAKMTNMRFLKIHGWSKFTIFNVCFPNGLDTLSHKMRYLYWDGFCLESLPSNFCAEQLVELCMRCSKLKKLWDGVQNLVNLKTIDLWGSRDLIEIPDLSKAEKLENVSLCYCESLWQLQVHSKSLRVLNLYGCSSLRKFSVTSDELTKLNLAFTAICSLPSSIWLKGKLKSLYLKGCCNLQELTDEPRIYGSQKHFSTFASNVERLSMNIKNLSTLTMLWLDDCKKLVSLPKLWPSLEKLSASNCISLDSYVTQWLVLQHMLHSRIPYIRKHYLKCYDEEYFFPGDHVIDECGFCTTESSITIPYLLKTELYGFIYSIVLSKGSVLQSDVSCSVYQDGIRVGWLQRLLEYESLISNHVLFMYHDINEFHIITELHGHFFCNITFIFENSGESIKEIGVFPIYGSGSGLKLADWQQRSF 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01210 673 SMART till_3 6 140 IPR000157 GO:0007165
Spst7g01210 673 SUPERFAMILY L domain-like 249 515 - -
Spst7g01210 673 Gene3D Ribonuclease Inhibitor 375 518 IPR032675 -
Spst7g01210 673 ProSiteProfiles TIR domain profile. 5 160 IPR000157 GO:0007165
Spst7g01210 673 FunFam Disease resistance protein (TIR-NBS-LRR class) 3 163 - -
Spst7g01210 673 Pfam Leucine Rich Repeat 312 331 IPR011713 -
Spst7g01210 673 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 143 IPR035897 -
Spst7g01210 673 Pfam TIR domain 7 144 IPR000157 GO:0007165
Spst7g01210 673 SUPERFAMILY "Winged helix" DNA-binding domain 152 227 IPR036390 -
Spst7g01210 673 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 159 502 IPR044974 GO:0006952
Spst7g01210 673 Gene3D Ribonuclease Inhibitor 217 374 IPR032675 -
Spst7g01210 673 Gene3D - 3 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01210 Spst-Chr7 39092060 39095746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01210 154 506 WRKY Transcription Factor Family AT4G12020 33.787 3.42e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01210 - - vun:114187776 878.241