Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01202 ATGATAAACATTCCTTGCAGTGGGAAAAAATTGAACGTGAGGCAAATTGGGAAAGAGAAAGTAGTGGTTGTAATGGGAGCCACAGGGACAGGGAAGTCAAGGCTGTCCATTGACCTAGCCACATGTTTTCCATCAGAAATCATAAACTTCGACAAAATTCAAGTCCACCAAGGTCTCGACATAGTCACAAACAAAATCCCAGAGGAGGACCAACGTGGCGTTCCGCACCACTTACTAGGAACAATAAACCCCAACCTAGACTTCACTCACAGTGATTTCATTGAAACCTCATCATCTGCCATTGACACCATCACCAGTCGCCAGAAGCTTCCAATCATTGTTGGCAGCTCCAACTCGTACCTCGAGGCCTTGATCGACTATGACGACTACGAGTTCCGGTCACGCTACGATTTTCTCTGCCTTTGGGTTGACGTGGTAATGCCGGTGCTTCAATCCTACGTGGCGGAACAGGTTGACGACATGTTAAGTAACAGAATGGTGGATGAGCTGAGACCCTTTTACAGTCCCGACGGGGATTACTCGAGAGGGGTTAGAAGAGCCATTGGGGTTCCTGAATTTGACGAGTATTTTCGGAGGGAGGAGTCTGTCGAAGAGGAAACGAAGCAGAGGTTGTTGGAACATGCGATTAAGGAAATTGAATTTAACACATGCAAGCTTGCGATGAAACAGTTAGGGAAGATTTACCAGCTGAGAAACGTTAAGAGATGGGAGATTCATCGCTTGGACGCCACACCCGTGTTTCGAAGGCGTGGCAAAGAAGCGAACCAGGCATGGAAGAAGATGGTGGCGGAACCTAGTGCTATGGTTGTTGCGCGTTTTCTCTATAACTCCAAAAATAATGCCAACGTTGTTTCTGGGCACAGAGTGTTGCCAGCTTCAGACAGTGTTATGGCTGCTGCAACGTGCTAA 930 0.4742 MINIPCSGKKLNVRQIGKEKVVVVMGATGTGKSRLSIDLATCFPSEIINFDKIQVHQGLDIVTNKIPEEDQRGVPHHLLGTINPNLDFTHSDFIETSSSAIDTITSRQKLPIIVGSSNSYLEALIDYDDYEFRSRYDFLCLWVDVVMPVLQSYVAEQVDDMLSNRMVDELRPFYSPDGDYSRGVRRAIGVPEFDEYFRREESVEEETKQRLLEHAIKEIEFNTCKLAMKQLGKIYQLRNVKRWEIHRLDATPVFRRRGKEANQAWKKMVAEPSAMVVARFLYNSKNNANVVSGHRVLPASDSVMAAATC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01202 309 FunFam Adenylate isopentenyltransferase 5, chloroplastic 147 245 - -
Spst7g01202 309 Pfam IPP transferase 54 126 - -
Spst7g01202 309 Pfam IPP transferase 132 231 - -
Spst7g01202 309 Gene3D - 18 281 IPR027417 -
Spst7g01202 309 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 147 245 - -
Spst7g01202 309 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 18 280 IPR039657 -
Spst7g01202 309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 130 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01202 Spst-Chr7 37296229 37297158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01202 134 281 C2H2 Transcription Factor Family AT2G27760 28.000 3.46e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01202 K10760 - gmx:100803964 483.026