Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01201 ATGGAAGAGCAAAGTAACCAAGAGAACCCTGTGCAACTAACATCGTGTGACACTGGGGGAACAACCAATGATGTCTCTCATTCAGCTGAGGGTCATCTCATTTCAAACCCAAAATTTGGCATTGCAGCATCATCTGGAAGAAATGGGAGCCACTGGACTTGCTTTCCTAAACCATCTCATAACTATGTTGAGTATCTTTCGGAATCCTCAACTTATCTGCCAAACACTTCCACTGATTACATGATGGGGGGTAGTTATCTACCTGTCGGCAACATCAATGATGGTAACGTGGTTGATGGATCGGACAGAAACTTCTTTTATAATGATCCAGGAAAAGTCTGTGCCTTTAAGCCTATTGGTTCTTCAAGTAATGACCTTGACATTAGGAAGGTGGGGTTTTGGAGAGCTGATGAAGGAGAGGAAGTAATTAAAGTTGAAACTGAAAGCAGTCAAAATTTTCTTTATGCAGAGAATCATGCTTTATGGACAGCAGATTCTCTTGGAGATAAGCATAATGCTTCACATGATCCAATGGTAATGGTTGGTGCACCTGCTTTACTTCCCAAACCGGGAAGCAGCTCCTCAAAAGAGAAAGCACGTATCACTGACCGTCAACGAAGGCAACGTATCGCTGATAACCTCAAAGCCTTACACGAATTGCTTCCAAATCCAGCAGAGAATGACCAGAAATTGGAACAAAGTGGAAGTAGATTGCAAGCGGAATCAACTGCTATACCTCTAGTTTTTCATGAGGGTTATGGGCACTATATCAACCAACAGATGCTGAACGAACCCCTTGAGGAGATAATGGGGAAACTGCTTGAAGAACATTCAGCAGCAGCTGGTCAGCTACTAGAGAGTAAGGGTCTATTCCTGCTGCCTATGGCTTTGGTTGATGAGTTGAGTGAGGCTATGCAAATGTTTGGGGGGAGTGCACTTGCCTGA 945 0.437 MEEQSNQENPVQLTSCDTGGTTNDVSHSAEGHLISNPKFGIAASSGRNGSHWTCFPKPSHNYVEYLSESSTYLPNTSTDYMMGGSYLPVGNINDGNVVDGSDRNFFYNDPGKVCAFKPIGSSSNDLDIRKVGFWRADEGEEVIKVETESSQNFLYAENHALWTADSLGDKHNASHDPMVMVGAPALLPKPGSSSSKEKARITDRQRRQRIADNLKALHELLPNPAENDQKLEQSGSRLQAESTAIPLVFHEGYGHYINQQMLNEPLEEIMGKLLEEHSAAAGQLLESKGLFLLPMALVDELSEAMQMFGGSALA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01201 314 MobiDBLite consensus disorder prediction 186 205 - -
Spst7g01201 314 CDD bHLH_AtbHLH_like 201 228 IPR045239 -
Spst7g01201 314 MobiDBLite consensus disorder prediction 1 30 - -
Spst7g01201 314 Gene3D - 191 239 IPR036638 GO:0046983
Spst7g01201 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 192 232 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01201 Spst-Chr7 37283708 37285640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01201 201 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 32.520 2.74e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Spst7g01201 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01201 - - gmx:100788949 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01201 7 37283708 37285640 Spst7g01201 7 37283708 37285640 ECH