Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01190 ATGGTTGGTGCACCTGCTTTACTTCCCATACCGGGAACCAGCTCCTCAAAAGAGAAAGCACGTATCACTGACCGTCAACGAAGGCAACGTATCGCTGATAACCTCAAAGCCTTACACGAATTGCTTCCAAATTCAGCAGAGGAACAAAGTGGAAGTAGATTGCAAACGGAATCAACTGCTATACCACTAGTTTTTTATGAGATAATGGGGAAACTACTTGAAGAACATTCAGCAGCAGCTGGTCAGCTACTAGAGAGTAAGGGTCTATTCCTGCTGCCTATGGCTTTGGTTGATGAGTTGAGTGAGGCTATGCAAAGGTTTGTGGGGAGTGCACTTGTCTGA 342 0.4561 MVGAPALLPIPGTSSSKEKARITDRQRRQRIADNLKALHELLPNSAEEQSGSRLQTESTAIPLVFYEIMGKLLEEHSAAAGQLLESKGLFLLPMALVDELSEAMQRFVGSALV 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01190 113 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 56 IPR036638 GO:0046983
Spst7g01190 113 Gene3D - 12 87 IPR036638 GO:0046983
Spst7g01190 113 Pfam Helix-loop-helix DNA-binding domain 17 52 IPR011598 GO:0046983
Spst7g01190 113 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01190 Spst-Chr7 36479178 36480338 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Spst7g01190 HLH 0.00022 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01190 - - gmx:100788949 155.221