Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01182 ATGAACAAGAGGTCTTTCGAGTATGCCTGGGTGCTTGACAAGCTCAAGGCTGAACGAGAAAGAGGAATCACCATTGATATTGCCCTCTGGAAGTTTGAGACCACCAAGTACTACTGCATAGTCATTGATGCCCCCGGACACAGGGATTTCATTAAGAATATGATTACTGGGACATCCCAAGCTGATTGTGTTGTTCTTATTATCGATTCCACTACCGGTGGTTTTGAAGCTGGTATTTCTAAGGATGGACAGACTCGTGAACATGCTCTCCTTACTTTCACTCTTGGTGTGAGGCAGATGATTTGCTGTTGTAACAAGATGGACGTTATCGGGAGTGGGTGCTGGGGGCTGTGGAAGTGGAATCCACTATCGCAGTCTCGACGGTGTCGTATTCACCACACTTCGGGTTCGACGGGTGCAATCGGCGGAGGTGGCTACCGGTTTCCGGTGAAGCAAGCGGTGACTGCTGCCTCCCTTGCCCTCACCGGCGACACAATTGCTTAG 504 0.5 MNKRSFEYAWVLDKLKAERERGITIDIALWKFETTKYYCIVIDAPGHRDFIKNMITGTSQADCVVLIIDSTTGGFEAGISKDGQTREHALLTFTLGVRQMICCCNKMDVIGSGCWGLWKWNPLSQSRRCRIHHTSGSTGAIGGGGYRFPVKQAVTAASLALTGDTIA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01182 167 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 13 28 IPR031157 -
Spst7g01182 167 Pfam Elongation factor Tu GTP binding domain 8 111 IPR000795 GO:0003924|GO:0005525
Spst7g01182 167 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 167 IPR000795 GO:0003924|GO:0005525
Spst7g01182 167 Gene3D - 1 139 IPR027417 -
Spst7g01182 167 PRINTS GTP-binding elongation factor signature 100 109 IPR000795 GO:0003924|GO:0005525
Spst7g01182 167 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Spst7g01182 167 PRINTS GTP-binding elongation factor signature 40 50 IPR000795 GO:0003924|GO:0005525
Spst7g01182 167 PRINTS GTP-binding elongation factor signature 56 67 IPR000795 GO:0003924|GO:0005525
Spst7g01182 167 PANTHER TRANSLATION FACTOR 1 109 - -
Spst7g01182 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 112 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01182 Spst-Chr7 36354978 36355481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01182 1 108 Eukaryotic Initiation Factors Gene Family AT1G07930 95.370 2.17e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01182 K03231 - twl:119988845 219.55