Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01181 ATGAAGATGATCCCTTGGGGTGGTCTCAGTTGCTGTTTGAGTGCTGCTGCTCTTTACCTTCTCGGCAGAAGCAGTGGCAGGGATGCGGAAATTCTTAAATCCGTCACGAGGGTCAATCAGTTGAAGGAACTAGCACAACTGTTAGATGCAGAAATATTACCCTTGATTGTTACAATTTCTGGAAGAGTTGGCTCTGAAACCCCAATTAACTGCGAGTTCAGTGGTTTAAGAGGTGTAATAGTTGAAGAAACAGCAGAACAACATTTTCTTAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCTTTAATGCTATCAATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGAGTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCCACTGGTTTTGCATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCGGGTCGGTCACTTGTACGTGGAACATTGGATTATCTCCAAGGTCTCAAGATGCTTGGGGTCAAGAGAATTGAACGGGTACTTCCAATTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGTCCATTCGAATTCAGCGACCCCACAAAGGGCCATTTTATGTTTCTCCCAAAACGATTGATCAACTTATTGCAAATCTGGGGAAATGGGCAAGGTGGTATAAGTATGCTTCTATGGGCTTGACAGTGTTTGGTGCTTATCTGATAGCCAAGCATGCTATTCGGTACATATTGGAAAGACGGCGCCGGAACGAAATACAAAGAAGGGTTCTTGCTGCAGCTGCGAAAAAGTCGGGACCAAATAATGATGTTGAAAAGGCCGACAGCTTATCAGATGGTACTAAAAGGGATCGCTTAATGCCAGATTTGTGCGTCATATGCCTCGAGCAGGAATATAATGCTGTTTTTGTTCCGTGTGGCCATATGTGTTGCTGTACAGCTTGTTCTTCACACTTGACCAATTGTCCTCTTTGCCGGCGACAGATAGAGAAGGTTGTAAAGACTTTCCGTCATTGA 1026 0.4464 MKMIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPLIVTISGRVGSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGSDRVHVVGARGATGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVVGEAAKDDVGSIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKHAIRYILERRRRNEIQRRVLAAAAKKSGPNNDVEKADSLSDGTKRDRLMPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTNCPLCRRQIEKVVKTFRH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01181 341 FunFam E3 ubiquitin-protein ligase SP1 282 340 - -
Spst7g01181 341 SUPERFAMILY RING/U-box 293 335 - -
Spst7g01181 341 PANTHER - 2 308 IPR044231 GO:0004842|GO:0016567
Spst7g01181 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 340 IPR013083 -
Spst7g01181 341 Pfam E3 Ubiquitin ligase 87 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Spst7g01181 341 Pfam Zinc finger, C3HC4 type (RING finger) 292 335 - -
Spst7g01181 341 CDD RING-HC_LRSAM1 294 337 - -
Spst7g01181 341 ProSiteProfiles Zinc finger RING-type profile. 294 329 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01181 3 268 C3H Transcription Factor Family AT1G63900 78.731 6.56e-156 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01181 K15688 - gmx:100803252 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01181 7 36348243 36352060 Spst7g01181 7 36348243 36352060 ECH