Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01174 ATGAAGGAGGAGGTGGAGGTTGAGATAGATGTGAAGGTGAAGGTCAAGGTTGACATGAAGGAGGAGGTGGAGGTTGAGATAGATGTGAAGGTGAAGGTCGAAGTGAAAAAGGTGGAGGTTGAGATGAAGGAGGAGGTGGAGGTGGAGGTTGAGATAAATGGGAAGGTGAAGGTGGAGGTGGACGTTGAGATGAAGGTGGAGGTCGAGATAAATTTGGAAATGGAGGTCGAAATGGTGATCGAAATGAAGGTAGAGGCCGAGTTATTTGCTTGGAATAAGTTTCAAGTGGTGGGGTTTCCGCAGCCACCAACAATTGTCTATCCGCAAAACAGAGTTCCCATTTCAAGAGCAAAGTCGATTAAGTCATCATCGCTCATGGATCAGCCGAAGCGGGTAGTTGTGTGCGGCGACGGAGTCATAGGAGTTTGCACGACTTACTTTCTGGGGGCGAAGGGAGTTGCCGTCACGCTCATTGAGATGTCCGACGTGGTGTGCGCCGCTTCTGGAAAAGCCGGCGGATTCCTCGCCTACGACTGCTGGTGTTCATGTTCAAATGACAAGTTTGCGTGTCTTGGTCATGCAAAACATTTTTGTTCTTGCCCTTGCAGCAACAAAATTCTCTTATACCGTTACGAGATCAGTGATTTGAATGTTCTTTGTCAAGCTTTGGATGGGAAATTAAGTGCAGTCTATAAATGGGCCAAAGAGTATCTCGGACTAACACTGACCTCTGTTGCCTCCAAGAGATCCAAACCACATCCCGAAAATGTTAGTTGTTCAACCTTCCCTTTACAAGACTTGCATATGAAAGAACCTATATCCCAGACATCATCAAATGAATCCTCAAAAGGGAAACGACGCAAATTGCAGGAAATATTGAATTCATCAAAGAAAAATCACAATGAAGTGGTTTCAAGTTCTTCGAAAAAGAAACAAAATGAAGTGGTTCCTGTTGAACATTCAAGGACTTGA 972 0.4506 MKEEVEVEIDVKVKVKVDMKEEVEVEIDVKVKVEVKKVEVEMKEEVEVEVEINGKVKVEVDVEMKVEVEINLEMEVEMVIEMKVEAELFAWNKFQVVGFPQPPTIVYPQNRVPISRAKSIKSSSLMDQPKRVVVCGDGVIGVCTTYFLGAKGVAVTLIEMSDVVCAASGKAGGFLAYDCWCSCSNDKFACLGHAKHFCSCPCSNKILLYRYEISDLNVLCQALDGKLSAVYKWAKEYLGLTLTSVASKRSKPHPENVSCSTFPLQDLHMKEPISQTSSNESSKGKRRKLQEILNSSKKNHNEVVSSSSKKKQNEVVPVEHSRT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01174 323 Gene3D - 115 196 IPR036188 -
Spst7g01174 323 MobiDBLite consensus disorder prediction 303 323 - -
Spst7g01174 323 PANTHER SARCOSINE DEHYDROGENASE-RELATED 124 179 - -
Spst7g01174 323 Pfam FAD dependent oxidoreductase 131 178 IPR006076 GO:0016491
Spst7g01174 323 MobiDBLite consensus disorder prediction 272 323 - -
Spst7g01174 323 Pfam C5HC2 zinc finger 181 217 IPR004198 -
Spst7g01174 323 SUPERFAMILY Nucleotide-binding domain 126 184 - -
Spst7g01174 323 MobiDBLite consensus disorder prediction 281 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01174 Spst-Chr7 36105912 36109421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01174 117 247 JUMONJI Transcription Factor Family AT1G08620 35.878 7.39e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01174 K11446 - gsj:114398457 189.119