Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01166 ATGACTCCCGTCAACCCCTTCTTCCTCTTCTTCATCTTCCTCCTTTCTCTCCCGTTCTCTTCCTTATCCGCTACGTGTCCCCTCAACTTCACCGTCCTTGGCACTACCAAGCCCTCCTCTTTCGACTCCTCCCGGTGCCGGGTCACCAGCCAAGCCCTCCACCTCGTCCAGTCCGATTACCTCCGCCGCAGCGGCTTCTTCCTCTCTCCCTCCAATGCCTCCGACTCCTGCTGGGAAAACTTTCAGTCCTATGTAAACCGCTTCGACCCGACCTTCGACATTCGCTCCTACTGCGGCTTCCAAACCTCGTGGATCTCCCAAGGCTGCGTCAACGTCACCACCAAACAAGATTTCGAAGACCTGGTTCCCCAATCTGCGCTTCAGGGCATTCAAAATAAGTGCAACCAATCGCTCGAGAATAACTCCCCCTGCGCCCTCTGCACCTCCTCCATGGCTGCCATCCCACCCTTGGGACAGTCCGTCGGCAACCTCACCAGCTGCACCGACTACTCTTCTCTCTACGCCGCCGCCTTCACTAATTTCCTCGGCCCCTCCGACCCCGGCACCGCCAAGTGCTTGTTCTCCCTCGAATTTCCCACCGCCGGTTCCTCCGCCGCCAAAAAAAGAAAGCTTCTTATTGCTCTTGTATCTGTTGTCTGTGTCGTGGTCTTCTCCCTGCTGGTTCTCGGCTTTTGGGCTTATCGCAAGTTGGAAGAGAAGGTGGCCCGGGATAAGGATTTTCGTATTGCGGAAATCGGTTTGGTTTCTGGGTTGGACTCCATGGAGCAGAGCACCACTTTGATCAAGTTTGTTTTCGATGATATCAAGAAGGCGACTAAGAATTTCTCCCGGGATAACATAGTTGGAAGAGGGGGTTACGGGAATGTGTACAAAGGGTTGCTTCCTGATGGGAGTGAGGTTGCGTTTAAGAGGTTCAAGAATTGTTCGGCTTCTGGTGATGCCAGTTTTACTCATGAGGTTGAGGTTATTGCCAGCGTGAGGCACGTTAACCTCGTTGCCCTGAGAGGTTATTGTTCTGTCACTACTCGTTTAGAAGGTTACCAGAGGATTATTGTTTGCGATATGGTGAAAAACGGGAGTCTCCATGATCATTTGTTTGGTTCCAATGGGGTGAAACTGAGTTGGCCAATTCGTCAGCAAATTGCTCTAGGCACGGCTAGAGGGTTGGCTTATTTGCATTATGGGGCTCAGCCTGCAATCATTCATAGGGATATTAAAGCAAGTAATATACTTTTGGATGAAAAGTTTGAAGCCAAGGTTGCAGATTTTGGACTAGCGAAGTTTAACCCGGAGGGGATGACGCATATGAGCACTAGGGTGGCTGGAACCATGGGGTATGTTGCTCCGGAATATGCTTTATATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTATGGGGTTGTGCTTCTTGAGCTTTTGAGTGGGAGGAAGGCGCTTCAGATGAACAATGATGGTCAACCTTCTGCTTTGACTGATTGGGCTTGGTCGTTGGTTAGAACAGGAAAGGCTTTGGATGTTATTGAAGATGGCATGCCACAACCTGGTTCACCACAAGTTCTTGAGAAGTATGTGTTAATTGCTGTGCTTTGTTCTCATCCGCAGTTGTATGCTAGACCAACAATGGATCAGGTTGTTAAAATGATGGAGACTGATGAATCGGTGCCCTCAATACCTGAACGGCCAATCCCTCTTGTTGCTGGGAGGCTTGATATTGATAGATCTGTGAGCAGTAGTGGCTCTGGTCAGCTCTCTAGTCCAACCGGTTATCAATCATATACCATAGAAAGTGATTACCAGTCTACTAATTCTAGGGAAGAAAGAAGCTCGAGCTCCAGGATTCTGAGTACAGATTGA 1878 0.4957 MTPVNPFFLFFIFLLSLPFSSLSATCPLNFTVLGTTKPSSFDSSRCRVTSQALHLVQSDYLRRSGFFLSPSNASDSCWENFQSYVNRFDPTFDIRSYCGFQTSWISQGCVNVTTKQDFEDLVPQSALQGIQNKCNQSLENNSPCALCTSSMAAIPPLGQSVGNLTSCTDYSSLYAAAFTNFLGPSDPGTAKCLFSLEFPTAGSSAAKKRKLLIALVSVVCVVVFSLLVLGFWAYRKLEEKVARDKDFRIAEIGLVSGLDSMEQSTTLIKFVFDDIKKATKNFSRDNIVGRGGYGNVYKGLLPDGSEVAFKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCSVTTRLEGYQRIIVCDMVKNGSLHDHLFGSNGVKLSWPIRQQIALGTARGLAYLHYGAQPAIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALQMNNDGQPSALTDWAWSLVRTGKALDVIEDGMPQPGSPQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDESVPSIPERPIPLVAGRLDIDRSVSSSGSGQLSSPTGYQSYTIESDYQSTNSREERSSSSRILSTD 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01166 625 Pfam SPARK 22 154 IPR043891 -
Spst7g01166 625 MobiDBLite consensus disorder prediction 582 625 - -
Spst7g01166 625 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 130 612 - -
Spst7g01166 625 SUPERFAMILY Protein kinase-like (PK-like) 265 572 IPR011009 -
Spst7g01166 625 Gene3D Phosphorylase Kinase; domain 1 253 361 - -
Spst7g01166 625 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 244 361 - -
Spst7g01166 625 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Spst7g01166 625 ProSiteProfiles Protein kinase domain profile. 282 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01166 625 Gene3D Transferase(Phosphotransferase) domain 1 363 564 - -
Spst7g01166 625 SMART serkin_6 282 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01166 625 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 363 564 - -
Spst7g01166 625 CDD STKc_IRAK 288 557 - -
Spst7g01166 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Spst7g01166 625 Pfam Protein kinase domain 283 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01166 Spst-Chr7 35852794 35854671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01166 7 611 Receptor kinase-like Gene Family AT2G48010 62.541 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Spst7g01166 Pkinase 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01166 - - gmx:100800760 1021.15