Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01165 ATGAAGGAAAAGGTGGATTCCCCAGTTACAGTCCTTGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCCAAAGAGCCTGCAGTGGATTCTGAATCTCAAGACCTTTCAAAACCTGCTTCTAGGTGGAATGCATTTCTTCAATTATTTAGGAGTGGGTCGAAGAAACAGATGAACACATTGCACCCTCTCAGTGCCCTCAAGCTCTCCAAAAGAATGAGCACTAGCATGAGGGAGACCATTCTCCCAAGTTGTTTCCTGGATGCAACTGCATCCCCTTGCAGGTCACCGTGGAAGATATTTACGCATCACGAGATTCAGGTTGCGACCAATTCATTTAGCCACGAAAATTTGATAGGGAAGGGTGGCTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCGTCAGCTAGTGGCAATTAAACGTTTGACAAGAGGAACAGCTGATGAAATCATAGGGGATTTCTTATCAGAACTTGGTGTAATGGCACACGTAAACCATCCCAATACTGCCAAGCTGGTTGGCTATGGAGTGGATGGTGGAATGTATCTTGTTCTTGAATTGTCAGAAAAAGGAAGCCTGGCTTCAGTTCTTTATGGTTCCAAGGAGAAACTAGCATGGTGTACAAGGCACAAAATTGCATTAGGAATAGCTAAGGGTATACTCTATCTTCATGAGGGTTGTCAAAGAAGAATTATCCACAGGGATATAAAAGCTGCCAATATCTTGCTCACGGAGGACTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTGCCAGAAAATTGGACTCACCACACTGTTTCAAAATTCGAAGGAACTTTTGGTTACCTAGCACCTGAATACTTGCTGCATGGCATAGTGGATGAGAAAACGGACATATTTGCCTTTGGTGTGTTGCTATTAGAATTAGTGAGTGGGCGTCGAGCACTTGATTATTCACAGCAAAGCCTTGTGTTGTGGGCAAAACCGTTGCTGAAAAAGAATGATATTGTGGAGCTGATTGATCCTTCACTAGCAGGTGACTTCGACTCGAGGCAAATGAATCTTATGCTCTTGGCTGCTTCTCTGTGCATACAACAGTCCTCGATTCGTCGCCCCTCTACAAAACAGGTTGTACAGCTTCTGAATGGCAACCTTAGCTGCTTTAAGGGCATGAAGAAAACCCGAATGCCATTTTTCAGAAGAGTCTTTCGAGAAGAACTCCATGATTCTGAATAG 1233 0.4371 MKEKVDSPVTVLEDYFRSSDSESSSSKEPAVDSESQDLSKPASRWNAFLQLFRSGSKKQMNTLHPLSALKLSKRMSTSMRETILPSCFLDATASPCRSPWKIFTHHEIQVATNSFSHENLIGKGGYAEVYKGCLPNRQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKLAWCTRHKIALGIAKGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDIFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIVELIDPSLAGDFDSRQMNLMLLAASLCIQQSSIRRPSTKQVVQLLNGNLSCFKGMKKTRMPFFRRVFREELHDSE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01165 410 Pfam Protein kinase domain 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01165 410 MobiDBLite consensus disorder prediction 14 38 - -
Spst7g01165 410 SMART serkin_6 115 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01165 410 Gene3D Phosphorylase Kinase; domain 1 90 189 - -
Spst7g01165 410 MobiDBLite consensus disorder prediction 1 38 - -
Spst7g01165 410 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 192 394 - -
Spst7g01165 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Spst7g01165 410 ProSiteProfiles Protein kinase domain profile. 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g01165 410 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 86 189 - -
Spst7g01165 410 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Spst7g01165 410 Gene3D Transferase(Phosphotransferase) domain 1 192 394 - -
Spst7g01165 410 PANTHER OS08G0249100 PROTEIN 6 405 IPR046958 -
Spst7g01165 410 SUPERFAMILY Protein kinase-like (PK-like) 96 380 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01165 Spst-Chr7 35835940 35838432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01165 103 382 Receptor kinase-like Gene Family AT1G53420 40.625 8.20e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Spst7g01165 Pkinase 8.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01165 - - gmx:100780587 766.148