Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01141 ATGAAAAACATGACTGGTTCTCCCAATGAAAAACAAAGAAGATGCGACTATTGTGGGGAATTCATAGCTCTTCTATATTGCAGAGCTGATTCTGCAAAGTTATGTTTATTCTGTGACCGCAAAGTTCACTTTCCCAACCAGCTTTTCTCCAAGCACTCGCGTACTCAGCTCTGTGATGGGTGTGGTGATTCCCCTGCATCGGTTCTCTGTTTCGCTGAGAACTCTGTTTTGTGCCACTACTGTGATTGCCAAATTCATAACAACCACTTGCTGTCTCAGGAACACCAACGGAGACCCCTTGAAGGGTTCTCTGGCTGCCCTTCTGTGACTCAGATGTTAATGATTCTGGGTCTTACTGAAAAATCTCTACATTCAACTGAGGGCGGAAGTTCCCATGAAGATGGCCTTTTCGATTCCCACATGTGGCATGCTCCTTCTGTTGTTGGTCTTGAATATTTGATTGCTTCCTCAGCTTCTTCTCATAAGAATCGTAACGGTGCGTGCGGGAGTAAGAAAGAAGAAATTCTGAGTCAGCTCCGTGAACTAATAAAGATGGAGCCTGACTTCATTCATGGAGAAGTAGATGCTGACCGAGAACTGAAAATTGAAAATCTGTCTACTGATTTTGAACGTAACGCAGAGGCTAATATGTTTCCTTCATACGAGGCAGGTGTGTTTTGTTGGCATGGAGAAAGCAGTGATCGTGCAAATCAAATTGTTCCTTCTGATACCTCAATGAATGATTATAACGACCTAATTTCATCTAAAGATCCAAGTTTTAGCATCCCTGCAACTCACAGCTATTGTAACAACCAAGGAAAATCATCAATTTATTTCATGGCTGAAAACTCATCCCCTACTCCTAAAGCTACTCCTTATGAGTTAACAAGTCATGAAAGAGATTCAGCATTACTGCGTTACAGAGAGAAGAAGAAAACAAGAAGGTATGACAAGCACATCAGATACGAATCACGAAAAGTTCGGGCAGAAAGCAGGATGAGAATTAAGGTTCACCTGAATATGACCCTCCAAGGAGATAAAGGAAAGTTGAAGAGCTAA 1059 0.4202 MKNMTGSPNEKQRRCDYCGEFIALLYCRADSAKLCLFCDRKVHFPNQLFSKHSRTQLCDGCGDSPASVLCFAENSVLCHYCDCQIHNNHLLSQEHQRRPLEGFSGCPSVTQMLMILGLTEKSLHSTEGGSSHEDGLFDSHMWHAPSVVGLEYLIASSASSHKNRNGACGSKKEEILSQLRELIKMEPDFIHGEVDADRELKIENLSTDFERNAEANMFPSYEAGVFCWHGESSDRANQIVPSDTSMNDYNDLISSKDPSFSIPATHSYCNNQGKSSIYFMAENSSPTPKATPYELTSHERDSALLRYREKKKTRRYDKHIRYESRKVRAESRMRIKVHLNMTLQGDKGKLKS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01141 352 ProSiteProfiles CCT domain profile. 300 342 IPR010402 GO:0005515
Spst7g01141 352 CDD Bbox1_BBX-like 15 57 - -
Spst7g01141 352 CDD Bbox1_BBX-like 57 100 - -
Spst7g01141 352 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Spst7g01141 352 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 14 336 - -
Spst7g01141 352 SMART bboxneu5 58 100 IPR000315 GO:0008270
Spst7g01141 352 SMART bboxneu5 10 57 IPR000315 GO:0008270
Spst7g01141 352 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
Spst7g01141 352 Pfam CCT motif 300 336 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01141 Spst-Chr7 35352410 35355363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01141 10 315 C2C2-CO-like Transcription Factor Family AT2G47890 36.677 1.16e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Spst7g01141 CCT 5.8e-11 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01141 - - vun:114189938 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01141 7 35352410 35355363 Spst7g01141 7 35352410 35355363 ECH
Spst1g02581 1 34337310 34340612 Spst7g01141 7 35352410 35355363 PCT