Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst7g01141 | ATGAAAAACATGACTGGTTCTCCCAATGAAAAACAAAGAAGATGCGACTATTGTGGGGAATTCATAGCTCTTCTATATTGCAGAGCTGATTCTGCAAAGTTATGTTTATTCTGTGACCGCAAAGTTCACTTTCCCAACCAGCTTTTCTCCAAGCACTCGCGTACTCAGCTCTGTGATGGGTGTGGTGATTCCCCTGCATCGGTTCTCTGTTTCGCTGAGAACTCTGTTTTGTGCCACTACTGTGATTGCCAAATTCATAACAACCACTTGCTGTCTCAGGAACACCAACGGAGACCCCTTGAAGGGTTCTCTGGCTGCCCTTCTGTGACTCAGATGTTAATGATTCTGGGTCTTACTGAAAAATCTCTACATTCAACTGAGGGCGGAAGTTCCCATGAAGATGGCCTTTTCGATTCCCACATGTGGCATGCTCCTTCTGTTGTTGGTCTTGAATATTTGATTGCTTCCTCAGCTTCTTCTCATAAGAATCGTAACGGTGCGTGCGGGAGTAAGAAAGAAGAAATTCTGAGTCAGCTCCGTGAACTAATAAAGATGGAGCCTGACTTCATTCATGGAGAAGTAGATGCTGACCGAGAACTGAAAATTGAAAATCTGTCTACTGATTTTGAACGTAACGCAGAGGCTAATATGTTTCCTTCATACGAGGCAGGTGTGTTTTGTTGGCATGGAGAAAGCAGTGATCGTGCAAATCAAATTGTTCCTTCTGATACCTCAATGAATGATTATAACGACCTAATTTCATCTAAAGATCCAAGTTTTAGCATCCCTGCAACTCACAGCTATTGTAACAACCAAGGAAAATCATCAATTTATTTCATGGCTGAAAACTCATCCCCTACTCCTAAAGCTACTCCTTATGAGTTAACAAGTCATGAAAGAGATTCAGCATTACTGCGTTACAGAGAGAAGAAGAAAACAAGAAGGTATGACAAGCACATCAGATACGAATCACGAAAAGTTCGGGCAGAAAGCAGGATGAGAATTAAGGTTCACCTGAATATGACCCTCCAAGGAGATAAAGGAAAGTTGAAGAGCTAA | 1059 | 0.4202 | MKNMTGSPNEKQRRCDYCGEFIALLYCRADSAKLCLFCDRKVHFPNQLFSKHSRTQLCDGCGDSPASVLCFAENSVLCHYCDCQIHNNHLLSQEHQRRPLEGFSGCPSVTQMLMILGLTEKSLHSTEGGSSHEDGLFDSHMWHAPSVVGLEYLIASSASSHKNRNGACGSKKEEILSQLRELIKMEPDFIHGEVDADRELKIENLSTDFERNAEANMFPSYEAGVFCWHGESSDRANQIVPSDTSMNDYNDLISSKDPSFSIPATHSYCNNQGKSSIYFMAENSSPTPKATPYELTSHERDSALLRYREKKKTRRYDKHIRYESRKVRAESRMRIKVHLNMTLQGDKGKLKS | 352 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst7g01141 | 352 | ProSiteProfiles | CCT domain profile. | 300 | 342 | IPR010402 | GO:0005515 | |
Spst7g01141 | 352 | CDD | Bbox1_BBX-like | 15 | 57 | - | - | |
Spst7g01141 | 352 | CDD | Bbox1_BBX-like | 57 | 100 | - | - | |
Spst7g01141 | 352 | ProSiteProfiles | Zinc finger B-box type profile. | 53 | 100 | IPR000315 | GO:0008270 | |
Spst7g01141 | 352 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 10 | 14 | 336 | - | - | |
Spst7g01141 | 352 | SMART | bboxneu5 | 58 | 100 | IPR000315 | GO:0008270 | |
Spst7g01141 | 352 | SMART | bboxneu5 | 10 | 57 | IPR000315 | GO:0008270 | |
Spst7g01141 | 352 | ProSiteProfiles | Zinc finger B-box type profile. | 10 | 57 | IPR000315 | GO:0008270 | |
Spst7g01141 | 352 | Pfam | CCT motif | 300 | 336 | IPR010402 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst7g01141 | Spst-Chr7 | 35352410 | 35355363 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst7g01141 | 10 | 315 | C2C2-CO-like Transcription Factor Family | AT2G47890 | 36.677 | 1.16e-55 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-CO-like | Spst7g01141 | CCT | 5.8e-11 | CL0281 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst7g01141 | - | - | vun:114189938 | 525.783 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst7g01141 | 7 | 35352410 | 35355363 | Spst7g01141 | 7 | 35352410 | 35355363 | ECH | |
Spst1g02581 | 1 | 34337310 | 34340612 | Spst7g01141 | 7 | 35352410 | 35355363 | PCT |