Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01113 ATGGCGGAAGAACACCGATGCGAGACTCCGGAAGGTCACCGTCTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCTCTGCCACCATGAACCTCTGCTCCAAATGCTACGGCGCGATCAGTTTGAAGGAGCAGGAAGACGCGTCGACCAAATCCAAAATCGAAACCGCGCTTTCTTCCTCCGCGAAGACGCCGTTGTCCACGTCGCCTCCGGCGGTGGTTGATGTCCTTATCAAAGCTTCGTCTCAGCCTCTGCCTCAGCCTCCGGCTGAAGTCTTGGTCACGGTTCCAGTTCAGGTCGTTGTGGCATCGAGTTCTGTAGCCTTAGGTTCGGCGCAACCGAACCGGTGCGCCTCGTGTCGGAAGCGCGTGGGATTGACCGGGTTCAAGTGCAGGTGCGGAGTTACCTTTTGCGGGGCCCACAGGTATCCGGAGAAGCACGCGTGCGTGTTCGACTTTAAGACGGTGGGGCGAGAGGAGATTGCTCGGGCCAACCCCGTGATCAAAGCGGAGAAGCTGCGGAGGATATGA 528 0.5871 MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYGAISLKEQEDASTKSKIETALSSSAKTPLSTSPPAVVDVLIKASSQPLPQPPAEVLVTVPVQVVVASSSVALGSAQPNRCASCRKRVGLTGFKCRCGVTFCGAHRYPEKHACVFDFKTVGREEIARANPVIKAEKLRRI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01113 175 ProSiteProfiles Zinc finger AN1-type profile. 110 156 IPR000058 GO:0008270
Spst7g01113 175 FunFam Zinc finger AN1-type containing 6 94 171 - -
Spst7g01113 175 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 175 - -
Spst7g01113 175 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Spst7g01113 175 Gene3D - 98 171 IPR035896 -
Spst7g01113 175 SMART AN1_Zf_4 116 153 IPR000058 GO:0008270
Spst7g01113 175 Pfam AN1-like Zinc finger 116 152 IPR000058 GO:0008270
Spst7g01113 175 SUPERFAMILY AN1-like Zinc finger 109 170 IPR035896 -
Spst7g01113 175 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Spst7g01113 175 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Spst7g01113 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 57 - -
Spst7g01113 175 Gene3D - 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01113 Spst-Chr7 33898692 33899219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01113 1 175 C2H2 Transcription Factor Family AT3G52800 50.282 5.56e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01113 - - gmx:100788323 260.381