Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01081 ATGGAAGAGGTTGAGCAAGCTAATAGAGCAGCTGTTGAAAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAACCAAGAGATCAGGTTCAGCATAGGAATTTAGTGGTGGAAGCTGGGGATGCTGTGGTGAGGTTCAAGAAGGTTGTGTCCTTGCTTCATATTGGTTTGGGTCATGCAAGAGTGAGGAAGGTTAAAAACCCGCTAGTCCCCTTTACCCACCACAGTATCTTCTTAGACAACCCAAATTGCAAAACCAACGACCATCACTCAAAAAATCTGCAGTTATCCCAAACAAGCTTTCCTGACAATTCAATTCAGGAACTGGGGTCAACCACTAAACATTCACTCTCTCTTGGACAGCCCTCTTTGGAATTGAGCTCCAGTGGGAAAAGTCCGCTTCACCTCACTCAGCAGGCTTCATCAACTCACTATCACTTCTTTCAGCAACACCAAAGGTTGTTGCTCCAGCAGCAACAGCAACAACAGCAGCAACATATGAAGCATCAAGCAGAAATGATGTTCCGAAGGAACAACAGTGGCATAAACCTGAATTTTGACAGTACTAGCTGCACACCAACAATGTCATCTAACAGGTCTTTTATTTCTTCCTTGAGTATAGATGGAAGTGTGGCTAACTTGGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACTCTCTTCTGATCACAATTCGCAACAGCACAAGAGAAAATGTGCAAGAGGTGATGAGGGCAGCTTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCTAAGAAGAGGAAACATAGAATGAAGAGGTCAATTAAGGTGCCTGCTATTAGCAATAAACTTGCAGATATTCCTCCTGATGATTATTCGTGGAGGAAGTATGGCCAAAAGCCAATCAAGGGCTCTCCTCATCCTAGGGGATACTATAAATGCAGCAGCATGAGAGGGTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCGACCATGCTAATTGTTACCTATGAAGGCGAACATAACCACCCTAAGTTACCAACGCAATCTACAAATGCATGA 1050 0.4448 MEEVEQANRAAVESCHRVLSLLSQPRDQVQHRNLVVEAGDAVVRFKKVVSLLHIGLGHARVRKVKNPLVPFTHHSIFLDNPNCKTNDHHSKNLQLSQTSFPDNSIQELGSTTKHSLSLGQPSLELSSSGKSPLHLTQQASSTHYHFFQQHQRLLLQQQQQQQQQHMKHQAEMMFRRNNSGINLNFDSTSCTPTMSSNRSFISSLSIDGSVANLDGSAFHLIGAPLSSDHNSQQHKRKCARGDEGSLKCGSSSRCHCSKKRKHRMKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSTNA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01081 349 FunFam WRKY transcription factor 65 265 342 - -
Spst7g01081 349 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 348 IPR044810 GO:0003700
Spst7g01081 349 Pfam WRKY DNA -binding domain 283 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst7g01081 349 SUPERFAMILY WRKY DNA-binding domain 279 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst7g01081 349 Pfam Plant zinc cluster domain 235 279 IPR018872 -
Spst7g01081 349 MobiDBLite consensus disorder prediction 101 134 - -
Spst7g01081 349 ProSiteProfiles WRKY domain profile. 276 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst7g01081 349 Gene3D WRKY domain 267 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst7g01081 349 SMART WRKY_cls 281 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01081 Spst-Chr7 24529671 24531511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01081 1 346 WRKY Transcription Factor Family AT2G30590 57.068 4.78e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst7g01081 WRKY 4.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01081 - - gmx:100170681 589.726