Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01080 ATGACAGATATATTTGAAAACCAATCATCTCCTGATTCTGCAAATTATGCATCAAGCAGTGGCCTATCTGTGGACGATAAGGAGATTGAATATAGAGCTGCAACATCAAAACATATACATCTTTTGGCCAATAAATCTGCTTTCCACTTCTTGTCCATCAAAATTGACTTGAATTTCGCTCGCATGGTGATGGCAGAGGTGGTGGGTACTTTTATTTTGATGTTCTGTGTATGTGGAATCAGTGCAAGCACACAATTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGCTACAGCAGGGTTAACAGTGGTGGTGATAATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCTACAATGGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACATAGGTAGCCTTGTATACGGCATAAAATCAGATGCTATCATGACCATGCCACTTCATGGGTGCAACTCTGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATCATGTTCCTTATTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGTATAGCAATTGGGCTTGCTGTGCTAATCACAGGCCCTGTCTCAGGTGGGTCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTGTCTCATGGAAGTTTAAGAACATATGGATATACTTGGTAGCCCCCAGTGGTGGAGCTGTGGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTCGAGACCAATATTCTACTACTTTGTCCTCCCCAAACATCAGCGATGTTGGTCGTCCCAAACGCTTTTGCTCAAGGAGAAGTGAGCCCTTGATTTTGCTGGTACAGAAAAATTGGAGTTTGTTCTCTGAAAGATTAGAAGTGTTCAGACAGAGATATGTCTTAGGAACAAAAGTATCAGATGGTGTCTATCGTAAACTGCCACTGTAG 1020 0.4314 MTDIFENQSSPDSANYASSSGLSVDDKEIEYRAATSKHIHLLANKSAFHFLSIKIDLNFARMVMAEVVGTFILMFCVCGISASTQFQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATMGQFPWFKVPVYIIAQTVGSMSATYIGSLVYGIKSDAIMTMPLHGCNSAFWVELIATFIIMFLIAALTSESQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFKNIWIYLVAPSGGAVAGAAMFRFLRLRDQYSTTLSSPNISDVGRPKRFCSRRSEPLILLVQKNWSLFSERLEVFRQRYVLGTKVSDGVYRKLPL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01080 339 PANTHER AQUAPORIN NIP2-1 37 274 IPR034294 -
Spst7g01080 339 MobiDBLite consensus disorder prediction 1 20 - -
Spst7g01080 339 Gene3D Glycerol uptake facilitator protein. 21 280 IPR023271 -
Spst7g01080 339 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Spst7g01080 339 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01080 339 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01080 339 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01080 339 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01080 339 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01080 339 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01080 339 Pfam Major intrinsic protein 58 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01080 339 SUPERFAMILY Aquaporin-like 57 272 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01080 Spst-Chr7 23918035 23920302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01080 20 296 Major Intrinsic Protein MIP AT4G10380 37.102 7.09e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01080 K09874 - gmx:100817660 424.476