Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01057 ATGGTTGAAAACCTAGAAGATGAGAAAATTAATAAACTGCTGCTGAAGTTGGCAGATGCAAAAGTTTTGGTGAGAGGGATTCCAGAAAATATTGTTGTTGGCTCTCATGTTTGGGTTGGAGATCCAGAACTAGTTTGGATTGATGGACAAGTACTGAATATCAACGGAGAAGAAGCTGAAATTCAAACTAGCAATGAGAAGAAGGTTCTTTCCCGTTTGTCAAAATTATATCCCAAGGATGTGGATGCGCCTACTGAAGGAGTTGATGACATGACCAAGCTTGCTTATTTGAATGAGCCAGGAGTGCTGCATAATTTGGAAACTAGATACATGATGAATGAAATATATACATATACCGGAAATATTCTCATTGCAATCAATCCCTTCCAAAGTCTTTCACATCTGTATGATACTAATGTGATGCAAAGATACAAGGGAGCAATGTCCGGAGAGTTGAGCCCACATGTTTTTGCAATTGCTGAAGCAGCATATAGGGAAATGATTAATGAGGATAAAAGCAACTCTATTCTTGTTAGTGGTGAGAGTGGTGCTGGCAAGACGGAAACCACCAAAATGCTTATGCAGTACCTGGCATATTTGGGTGGTCACACTGCATCCGAAGGACGAACTGTCGAAAAACAAGTTCTAGAAGTGGTACGGTTGAAGCATGAGACAACTTTGGAGGGTGAAAGTGCTCCAAAATTTATGGGAGAGGAAGTGGTAATGCAATTGGGATGGAGTTATCAAGCTCGAGGGTAA 759 0.4071 MVENLEDEKINKLLLKLADAKVLVRGIPENIVVGSHVWVGDPELVWIDGQVLNINGEEAEIQTSNEKKVLSRLSKLYPKDVDAPTEGVDDMTKLAYLNEPGVLHNLETRYMMNEIYTYTGNILIAINPFQSLSHLYDTNVMQRYKGAMSGELSPHVFAIAEAAYREMINEDKSNSILVSGESGAGKTETTKMLMQYLAYLGGHTASEGRTVEKQVLEVVRLKHETTLEGESAPKFMGEEVVMQLGWSYQARG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01057 252 PANTHER MYOSIN 78 218 - -
Spst7g01057 252 Pfam Myosin N-terminal SH3-like domain 34 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst7g01057 252 ProSiteProfiles Myosin motor domain profile. 86 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01057 252 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 32 81 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst7g01057 252 Gene3D Kinesin motor domain 36 222 IPR036961 -
Spst7g01057 252 SMART MYSc_2a 80 251 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01057 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 216 IPR027417 -
Spst7g01057 252 PRINTS Myosin heavy chain signature 173 198 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01057 252 PRINTS Myosin heavy chain signature 116 135 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01057 252 Pfam Myosin head (motor domain) 88 217 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01057 Spst-Chr7 21238184 21241532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01057 26 217 Myosins gene family AT1G08730 73.438 1.72e-95 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01057 K10357 - gmx:100803485 365.155