Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01056 ATGTCAAATCCAGTTCTTGAAGCATTTGGTAATGCAAAAACTGTTAGAAATGACAATTCCAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAGGTTGGACGAATATCTGGTGCAGCCATTAGAACTTATTTGCTTGAGAAATCTCGAGTTTGCCAAATCTCAGATCCTGAGCGTAACTATCACTGTTTTTACCTTCTCTGTGCTTCTCCACCTGAGGAAAAGGAGAAATATAAGTTGGGAGATCCTAGATCATTTCACTACCTTAACCAGTCCAATTGCTACGAATTATCTGGTGTTAATGCTGCTCAAGAGTATCTCAGCACCAAGAGAGCCATGGATATTGTTGGAATCAGTCAGGAAGACCAGGATGCTATTTTCAGAGTTGTAGCTGCTATACTTCATCTTGGAAATATTAAGTTTGCAAAATCAGAAGAAAATGATTCATCAGTTCTAGAAGATGAAGAATCCATGTTTCATCTCCAAACAACAGCAGAACTTCTTATGTGTGATGCTAAGACTTTGGAAGGTGCACTCCTTGAGCGTGTGATGATTACCCCAGATGATATCATAAAAAAAAGTCTTGATCCTCTGGGTGCTGCACATGTGTTTAAGATGGAGCAAGAGGAATATACAAAAGAAGGGATTAACTGGAGCTACTTAGAATTTGTGGATAATCAAGATGTACTAGATCTCATTGAAAAGCCGGAGAAAATCTTGATTCCCTATGGTGTTCAACACTACTTTAAGGGTGTCAAATGTCGTGAAAGCTTAAACTTAGGCAGAGTACTAGAGGCCGCAAAATGGATTTATATCTCAAACACTATGTTTCCTAAATCAACTCATGAAACATTTTCACAGAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATTAAGCCGAAATTGACACGCTCAGACTTCACTATTATTCATTATGCAGGAGAGGTTCAGTACCAGTCTGAGCACTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGAGATACTAAGTGCTTCCAAATGTTCATTTGTATCAGGTCTTTTTCCTCCACTTTCCGAGGAGACAGCCAAATCTTCCAAGTTTTCTTCCATTGGTTCTCGTTTCAAGGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTCCCTACTCACTGGACCTTCCAGGATTTTTTAACTCGATTAGGCATTCTTGCTCCAGAGGTACTTCGAGGGAACTTCGATGAAAAGGATTCATGTAAGAAGATATTGGAGAAGATTGGGCTGACAGATTATCAGATAGGGGAAACAAAAATATTCCTAAGAGCTGGTCAGATGGCTGAATTGGATGCTCGGAGGGCATTCCTGCTTAATAATTCTGCTACGGTTATTCAAAAGCATGCTAAATCTCGATTTACTCGGAAAACATATATTGCATTGCAAAAGTCCTCTGTTTTTCTGCAATCCATTTGCAGAGGAGAACTGGCTCGAGGTTCGTATTTTCAAATGAAGAATAGGGAAGCGGCTGCAGTCAGAATTCAAAAGCATATGCGTCGATCACTAGCTAGGAAACGGTACACTGAAATACAGACCTCTGCAAATGTGTTGCAGACAGGTTTTCGAGCAATGGCTGCTTGTAATAAATTTAGAGACAGAAAGCAAACATATAGAAAGCAGATTTGTGCATCGACTACTATTCAGTCCTATTGGCGTCGACATAAAGCTCTCGTCGACTATCAGAACCTTAAGAAAGCATCAATCATTCAACAAAGCATCAGCTCCATTGATAAACAGGAAGAGAAGGTTTTGGAGACACTAGTGCAAAATGGAAGTCCTGCTAAGGAAGAATCTTCAAATCCTGTCCAAGAAGAATCTTCAAATCTTGACCGAGAAGAATCCTCAATTCTTTTCCATGATGAAGAAAGTATTGAAGCTATTAGGGATTCTTCTAGTCCTCTCGCAGACACTGAAAAAATTGAGATTCTTGCTTTGGAAGTAAAAGACTTAAAGAGTATCGTTGATTATCTTTTAGAGTAG 2034 0.3889 MSNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKVGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSNCYELSGVNAAQEYLSTKRAMDIVGISQEDQDAIFRVVAAILHLGNIKFAKSEENDSSVLEDEESMFHLQTTAELLMCDAKTLEGALLERVMITPDDIIKKSLDPLGAAHVFKMEQEEYTKEGINWSYLEFVDNQDVLDLIEKPEKILIPYGVQHYFKGVKCRESLNLGRVLEAAKWIYISNTMFPKSTHETFSQKLYQTFKDHKRFIKPKLTRSDFTIIHYAGEVQYQSEHFLDKNKDYVVPEHQEILSASKCSFVSGLFPPLSEETAKSSKFSSIGSRFKGVLEAVRIKCAGFPTHWTFQDFLTRLGILAPEVLRGNFDEKDSCKKILEKIGLTDYQIGETKIFLRAGQMAELDARRAFLLNNSATVIQKHAKSRFTRKTYIALQKSSVFLQSICRGELARGSYFQMKNREAAAVRIQKHMRRSLARKRYTEIQTSANVLQTGFRAMAACNKFRDRKQTYRKQICASTTIQSYWRRHKALVDYQNLKKASIIQQSISSIDKQEEKVLETLVQNGSPAKEESSNPVQEESSNLDREESSILFHDEESIEAIRDSSSPLADTEKIEILALEVKDLKSIVDYLLE 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01056 677 Gene3D - 60 118 - -
Spst7g01056 677 Gene3D Myosin VI head, motor domain, U50 subdomain 120 198 - -
Spst7g01056 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 503 IPR027417 -
Spst7g01056 677 ProSiteProfiles IQ motif profile. 505 533 IPR000048 GO:0005515
Spst7g01056 677 PANTHER MYOSIN 2 201 - -
Spst7g01056 677 FunFam Myosin heavy chain 60 115 - -
Spst7g01056 677 Pfam IQ calmodulin-binding motif 561 575 IPR000048 GO:0005515
Spst7g01056 677 Pfam IQ calmodulin-binding motif 507 525 IPR000048 GO:0005515
Spst7g01056 677 SMART iq_5 504 526 IPR000048 GO:0005515
Spst7g01056 677 SMART iq_5 478 500 IPR000048 GO:0005515
Spst7g01056 677 SMART iq_5 557 579 IPR000048 GO:0005515
Spst7g01056 677 SMART iq_5 455 477 IPR000048 GO:0005515
Spst7g01056 677 Gene3D - 199 382 - -
Spst7g01056 677 SMART MYSc_2a 1 454 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01056 677 MobiDBLite consensus disorder prediction 608 630 - -
Spst7g01056 677 Pfam Myosin head (motor domain) 276 364 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01056 677 Pfam Myosin head (motor domain) 202 240 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01056 677 Pfam Myosin head (motor domain) 373 441 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01056 677 Pfam Myosin head (motor domain) 2 196 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01056 677 ProSiteProfiles Myosin motor domain profile. 381 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01056 677 ProSiteProfiles Myosin motor domain profile. 1 380 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst7g01056 677 Gene3D - 388 454 - -
Spst7g01056 677 Gene3D - 456 505 - -
Spst7g01056 677 Gene3D - 506 558 - -
Spst7g01056 677 Gene3D Kinesin motor domain 2 59 IPR036961 -
Spst7g01056 677 ProSiteProfiles IQ motif profile. 479 508 IPR000048 GO:0005515
Spst7g01056 677 MobiDBLite consensus disorder prediction 609 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01056 Spst-Chr7 21219986 21238133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01056 2 590 Myosins gene family AT1G08730 52.655 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01056 K10357 - qsa:O6P43_010538 759.214