Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01053 ATGGCTTCTGCAACAACTGCAAATGACGCTGCGTCTGGTTCTTCCTTTGGATCCCCCTGCGGTGCATGCAAGTTCCTGCGAAGAAAATGTGCTGCAGACTGCATCTTTGCACCGTACTTCTGCTCCGAACAAGGAGCTGCTAGATTCGCCGCCATTCATAAGGTTTTCGGGGCTAGCAACGTTTCCAAGTTGCTCTTGCGTATACCAGATAGCGATCGTTTTGAGGCAATGGTCACAATTGCTTATGAAGCCCAAGCTCGAATCTCAGACCCTGTTTACGGTTGTGTCGCCCATATTTTCGCCTTGCAACAACAGGTAGCAAGCTTGCAGGCACAGCTAGTGCAAATGAAGGCACAGCTGGATCAGAACCAGATGGTACCCACAAACTTGGAGAATCATTGGTCAGAGAATGTTGGACATCCATTCAATCCATTTTGTCCCACTTCCATGAATAACCCTATATCTCCTCAGAGCTCACTTGATTCAATTGATTATAGCAGCAATATCAATGATGGAATGTGCATGCAAGATGTACAAAGCGGAGATTTCTCGTTCCAAGCTTGTTCTATGAAAAGATCATATAACAATGACTTGGGTGAGCTGCAAGAATTGGCACTCAGGATGATGAGGAACTCTGACTAG 642 0.4611 MASATTANDAASGSSFGSPCGACKFLRRKCAADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLRIPDSDRFEAMVTIAYEAQARISDPVYGCVAHIFALQQQVASLQAQLVQMKAQLDQNQMVPTNLENHWSENVGHPFNPFCPTSMNNPISPQSSLDSIDYSSNINDGMCMQDVQSGDFSFQACSMKRSYNNDLGELQELALRMMRNSD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01053 213 Coils Coil 99 119 - -
Spst7g01053 213 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
Spst7g01053 213 Pfam Lateral organ boundaries (LOB) domain 19 117 IPR004883 -
Spst7g01053 213 PANTHER LOB DOMAIN CONTAINING PROTEIN 15 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01053 Spst-Chr7 21051143 21052355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01053 4 211 AS2 family AT2G42430 51.220 2.00e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst7g01053 LOB 4.4e-37 No_clan