Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01052 ATGGAAGGAAACTATCTGAACAACAGTAGTACTCCACAGAGAGAGGAGAGCTTTGGCTTTGAGGAGCACACATGGGGAACTACATGGCCTGCTAGAAACTATGCTTGTAGCTTTTGCAAGAGAGAGTTTAGGTCTGCTCAAGCATTGGGTGGACACATGAATGTTCACAGAAGGGATAGGGCTAGATTGAGATCATCCTTATCTTCATGGGTTTCTGAATGCCCTAAACCTAACCCTAACACTAAGCCTAATAACCCAACTCTTCTTCCACCCTATTCTTCACCATCTCGTTCATCTGATGAGCCTTTGAACTATGCGAATCCTTCTCCACTTTGCAGTCCTTGTCTCACTTTGTCTTCTTCACCCCTCCCAACTTCTACCAGTGGAGACAAGAAACCAAGACTCAACACTTCTCATTCTCATTTTCCTCTTTTGAGCCATCAAAGCTGCGAAATTAAGATGTTGATGATGAGCAACAACAACACAAGGAGTGGTTTCAGTGGTAATGAGGAAATGAAGGACTGTGTAGGGGAGGAGGAGCACAAAGGTTTAAAGGACAATGAGCAAAACATTACGTTGGAATTAGGAATAGGGTTGCTTAAACACCAAGAGGAGAAGTTAGATTTGGAGCTTCGACTCGGCCATTTCTAG 651 0.4378 MEGNYLNNSSTPQREESFGFEEHTWGTTWPARNYACSFCKREFRSAQALGGHMNVHRRDRARLRSSLSSWVSECPKPNPNTKPNNPTLLPPYSSPSRSSDEPLNYANPSPLCSPCLTLSSSPLPTSTSGDKKPRLNTSHSHFPLLSHQSCEIKMLMMSNNNTRSGFSGNEEMKDCVGEEEHKGLKDNEQNITLELGIGLLKHQEEKLDLELRLGHF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01052 216 MobiDBLite consensus disorder prediction 122 141 - -
Spst7g01052 216 MobiDBLite consensus disorder prediction 1 21 - -
Spst7g01052 216 Pfam C2H2-type zinc finger 34 58 - -
Spst7g01052 216 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Spst7g01052 216 MobiDBLite consensus disorder prediction 1 15 - -
Spst7g01052 216 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Spst7g01052 216 SMART c2h2final6 34 56 IPR013087 -
Spst7g01052 216 MobiDBLite consensus disorder prediction 69 104 - -
Spst7g01052 216 Gene3D Classic Zinc Finger 15 79 - -
Spst7g01052 216 PANTHER OS07G0101800 PROTEIN 9 215 - -
Spst7g01052 216 SUPERFAMILY beta-beta-alpha zinc fingers 31 60 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01052 Spst-Chr7 20790549 20791199 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01052 22 214 C2H2 Transcription Factor Family AT3G23130 37.500 2.70e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst7g01052 zf-C2H2_6 5.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01052 - - gmx:102660985 273.478