Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01043 ATGACTGGTTCAGGATCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGTGCTACTCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTTCCTGTCAGTGACCGTTGTGAAGCTGCAGTCACAATTTCATATGAAGCTCAAGCAAGACTTCAGGATCCAATTTATGGCTGTGTCTCCCATATTTTTGCACTCCAACAACAGGTGGTCAATTTACAAGCACAACTGGCTAACCTTAAGGAACAAGCAGCTCAGAGTTGTCTCAATGCCTCTGTCAATGGAAACCCTAGTGAAAAATTATTTGAAAAATCTTCAGCTGCTTTTCCGCAAGATCTCCAAAGTTGGTTTCAGGTGGAAAATTTCAACCAGGGGCCAGAATTTCCTCCTAACATGTGTACTAATTTATCAACACAAAAACATTATGGGAACAATGCTCTCATGGAAGATCTAAATCCTATTGGGGTTAATTGTGAAAATTGCGGTGCCATGGAAGAAAATAGCTCCTTTTCTGGCTTTGATGAGTGTTCTAATAGCTATTCCATGTCTTATGACATGCAAACAAACAAGAGAACGTGGGGTTTTCATGAAGTGGAGGACCTACATTCAGTGGCTTTTGGATACAGTGCACGATCACATTCCTGA 717 0.417 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLANLKEQAAQSCLNASVNGNPSEKLFEKSSAAFPQDLQSWFQVENFNQGPEFPPNMCTNLSTQKHYGNNALMEDLNPIGVNCENCGAMEENSSFSGFDECSNSYSMSYDMQTNKRTWGFHEVEDLHSVAFGYSARSHS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01043 238 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 149 - -
Spst7g01043 238 Coils Coil 87 114 - -
Spst7g01043 238 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Spst7g01043 238 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01043 Spst-Chr7 19635006 19635860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01043 7 232 AS2 family AT3G58190 50.216 9.59e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst7g01043 LOB 5.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01043 K13945 - gmx:100776678 425.246