Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01030 ATGAAGTCAAGATTTCTTAGAGGGTGTCTTAACAAGTGCAAGAAAATGTGCCTCAACAAGTGCATATCTTGTGAGGACTGTTGTGAATGGGCTTGGTGGTCTTCTTTGCATGAAGGTTGTTCCAGTATTCCAAGTGATGTTCCAAAGGGTCACTTGGTTGTGTACGTGGGAGAGAACCACAAGAGATACGTGATCAAGATTGCATTGCTCCACCATCCACTCTTCAGGGCCTTGTTGGATCAAGCTCAGGAAGAGTATGATTTCATTGCAGATTCAAAACTCTGTATTCCCTGCGATGAACGCCTCTTCCTCAATGTCCTTCGATGTGCTAGCTCCCCACAGAACCAACGAGTGTGTCTTGGTCTTTGA 369 0.4526 MKSRFLRGCLNKCKKMCLNKCISCEDCCEWAWWSSLHEGCSSIPSDVPKGHLVVYVGENHKRYVIKIALLHHPLFRALLDQAQEEYDFIADSKLCIPCDERLFLNVLRCASSPQNQRVCLGL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01030 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 105 IPR003676 GO:0009733
Spst7g01030 122 Pfam Auxin responsive protein 39 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01030 Spst-Chr7 18405944 18406312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01030 32 117 Calmodulin-binding Proteins AT4G34750 46.739 3.05e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01030 K14488 - gmx:100812927 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01030 7 18405944 18406312 Spst7g01030 7 18405944 18406312 ECH
Spst1g02888 1 37480145 37488283 Spst7g01030 7 18405944 18406312 PCT