Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01016 ATGCAAAGAGAACATCTGCGTAAAGGGACTTGGCTTCAAGAGGAAGATGAACAATTGACAAGCTTTGTGGCCCGTCTTGGGGAACGAAGGTGGGATTCCCTTGCCAAAGTTTCTGGACTCGGGAGAAGTGGTAAGAGTTGTAGGTTAAGATGGATGAACTATCTTCGTCCAAATTTGAAGCATGGTCCTTTTAATGTTGAAGAAGAACAGCTTATTGTTCAGCTTCAGAAGCAATTGGGCAATAAGTGGGCAAAGATTGCTAAGAGACTTCCAGGAAGAACTGATAATGAAATCAAGAATTACTGGAGAACTCATTTGAGGAAAAAAGCTCAAGTTCAACAAGGAGGAGATTTCAAGCATAAACTAGAAAGTGGAACACAAGATTTGAACCAACAAAGCATTGATATGGTTTCCAAGGATTACAGCACAGGAAAAGTTAGTTGTCAAGATAGTGAGTGGGAGACAAAGGATAGCTCCATGGACACTTTACCCTTATCAGATTGGGAATTGAGAAGATCACCCTATGAAACTAGGATATTGGATTGGATAGCAGAATTGAAAAAGGGTTATTGTGGGAAAGAACTAGAACAAGATTGTAATAGTACAGGAAAGTGCAACCATAATCCTCAAGAATTTGAGGAGGGGTCTGACTCATGGGATTATTCAGGTTCCTTATGGGATATGAACTAA 690 0.4014 MQREHLRKGTWLQEEDEQLTSFVARLGERRWDSLAKVSGLGRSGKSCRLRWMNYLRPNLKHGPFNVEEEQLIVQLQKQLGNKWAKIAKRLPGRTDNEIKNYWRTHLRKKAQVQQGGDFKHKLESGTQDLNQQSIDMVSKDYSTGKVSCQDSEWETKDSSMDTLPLSDWELRRSPYETRILDWIAELKKGYCGKELEQDCNSTGKCNHNPQEFEEGSDSWDYSGSLWDMN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01016 229 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Spst7g01016 229 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Spst7g01016 229 Gene3D - 1 61 - -
Spst7g01016 229 Gene3D - 62 136 - -
Spst7g01016 229 SMART sant 60 108 IPR001005 -
Spst7g01016 229 SMART sant 7 57 IPR001005 -
Spst7g01016 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Spst7g01016 229 CDD SANT 63 106 IPR001005 -
Spst7g01016 229 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Spst7g01016 229 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Spst7g01016 229 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 4 158 - -
Spst7g01016 229 CDD SANT 10 55 IPR001005 -
Spst7g01016 229 FunFam Myb transcription factor 8 60 - -
Spst7g01016 229 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Spst7g01016 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01016 Spst-Chr7 17946154 17947586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01016 1 111 MYB Transcription Factor Family AT5G59780 61.261 4.19e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst7g01016 Myb_DNA-binding 1.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01016 K09422 - gmx:100783472 392.504