Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01010 ATGGCGTTCCGCAGCAGCATCCGTGGGACCCGAGAAGCCACTCACCGCCACACTTTCAAAGCCGCTCTCTCCGAATTCATCTCCACACTCATCTTCGTTTTTGCCAGCTCCGGCTCCACCATCGCCGTCAAAAACCTCCCCGTCGACGCGCCCTCCGCTCTCGTCATCGTTGCCGTTGCCAACGCCTTCGCCCTCTTCGTCGCCGTCTCCGTCAGCACAAACGTCTCCGGCGGCCACGTCAACCCCGCCGTCACCTTCGGCGCCTTCATCGGCGGCAACCTCACCTTGCTCCGCTGCATTCTCTTCTGGATCGCTCAGATCCTCGGCTCCATCTTCGCATGCTTGCTCCTCAAATTCACCATCGGCGGACAGGGAGTACCAGTTTTTGAACTTTCGAGTGGTGTGAAAGAGGGAAAGGCGGTGGTTTTGGAGATGGTGATGACGTTTGGACTGGTGTACGCGGTGCATGCTACCACCGTTGACCCCAGGAGCAGAAAGAATAGTTTGGGAGCGATAGCGCCACTTGTAATTGGCTTCATTTTTGGAGCAAATGTTTTGGTGGCTGGGCCTTTGGATGGGGCCTCCATGAACCCGGCTGCGTCTTTTGGGCCTGCACTGGTGGGCTGGAGCTGGAAAAACCATTGGGTTTACTGGGTTGGGCCTCTCGTGGGCGGTGGGCTTGCTGGGTTTCTTTATGAGTTGGTTTTTGTTAGCTTCACCAGTCAGAGTTAA 732 0.5669 MAFRSSIRGTREATHRHTFKAALSEFISTLIFVFASSGSTIAVKNLPVDAPSALVIVAVANAFALFVAVSVSTNVSGGHVNPAVTFGAFIGGNLTLLRCILFWIAQILGSIFACLLLKFTIGGQGVPVFELSSGVKEGKAVVLEMVMTFGLVYAVHATTVDPRSRKNSLGAIAPLVIGFIFGANVLVAGPLDGASMNPAASFGPALVGWSWKNHWVYWVGPLVGGGLAGFLYELVFVSFTSQS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01010 243 Gene3D Glycerol uptake facilitator protein. 4 242 IPR023271 -
Spst7g01010 243 PANTHER AQUAPORIN-8 10 238 IPR034294 -
Spst7g01010 243 SUPERFAMILY Aquaporin-like 11 238 IPR023271 -
Spst7g01010 243 FunFam Probable aquaporin TIP1-1 4 243 - -
Spst7g01010 243 ProSitePatterns MIP family signature. 79 87 IPR022357 -
Spst7g01010 243 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01010 243 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01010 243 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01010 243 PRINTS Major intrinsic protein family signature 61 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01010 243 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01010 243 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01010 243 CDD MIP 20 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst7g01010 243 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01010 Spst-Chr7 17879629 17880683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01010 11 243 Major Intrinsic Protein MIP AT2G36830 63.136 7.81e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01010 K09873 - gmx:100820403 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01010 7 17879629 17880683 Spst1g02903 1 37628570 37630586 ECH
Spst7g01010 7 17879629 17880683 Spst10g00679 10 7037335 7039811 ECH
Spst7g01010 7 17879629 17880683 Spst7g01010 7 17879629 17880683 ECH
Spst7g01010 7 17879629 17880683 Spst5g00551 5 4494975 4496141 ECH
Spst1g02852 1 37095450 37096288 Spst7g01010 7 17879629 17880683 PCT