Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01006 ATGGCGGTTCCAGGGAGGCGCAACGGCATGAACGACGACGAAGAGGACTTTGACGACAACGCCCTTTTCGAAGAAGAAGGTCTCGTCGTAGAATTCAGCGATACTCCTCCTCACCTCCGCGACCTCTCCGCCTCCGCGGAGGCCGGCGACGTCCAGGCCCTCCGTCTCGCTCTAGATAACTTGACTGGTAGTATTGATGAGCCTGTGGAGGATGGGGATACTGTTCTTCATTTGACATGTTTATATGGCCATTTCGCTTGTGTTCAGCTGCTACTAGAAAGAGGAGCAAACATTGAGGCTAGGGATGAAGATGGTGCAATTCCTTTGCATGATGCTTGTGCTGGAGGATTTATCGAGATAGTCCAACTGCTACTTAACAAAGCAAATGACGCAGAACATATAAAGAGAATGCTGGAATCAGTTGATTCTGAGGGTGATACTCCTCTCCATCATGCAGCAAGAGGTGAGCATGTTGATGTAATTAACTTGTTGCTGTCTCATGGGGCATCTCTCGCAAAGGAAAACTTATATGGAAAGACCCCGGCAGATTTACCTGACCAGAACACTGATGCTCGGGCTTTGCTTCGCGCGGCCGTCCTTGCCATGACATGCTAA 615 0.4976 MAVPGRRNGMNDDEEDFDDNALFEEEGLVVEFSDTPPHLRDLSASAEAGDVQALRLALDNLTGSIDEPVEDGDTVLHLTCLYGHFACVQLLLERGANIEARDEDGAIPLHDACAGGFIEIVQLLLNKANDAEHIKRMLESVDSEGDTPLHHAARGEHVDVINLLLSHGASLAKENLYGKTPADLPDQNTDARALLRAAVLAMTC 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01006 204 Gene3D - 36 201 IPR036770 -
Spst7g01006 204 ProSiteProfiles Ankyrin repeat region circular profile. 104 130 - -
Spst7g01006 204 SUPERFAMILY Ankyrin repeat 42 184 IPR036770 -
Spst7g01006 204 ProSiteProfiles Ankyrin repeat region circular profile. 144 171 - -
Spst7g01006 204 ProSiteProfiles Ankyrin repeat profile. 144 176 IPR002110 GO:0005515
Spst7g01006 204 FunFam BRCA1-associated RING domain protein 1 36 203 - -
Spst7g01006 204 SMART ANK_2a 71 100 IPR002110 GO:0005515
Spst7g01006 204 SMART ANK_2a 144 173 IPR002110 GO:0005515
Spst7g01006 204 SMART ANK_2a 104 133 IPR002110 GO:0005515
Spst7g01006 204 ProSiteProfiles Ankyrin repeat profile. 104 136 IPR002110 GO:0005515
Spst7g01006 204 Pfam Ankyrin repeats (3 copies) 104 172 IPR002110 GO:0005515
Spst7g01006 204 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Spst7g01006 204 PANTHER SOWAH (DROSOPHILA) HOMOLOG 37 198 - -
Spst7g01006 204 Pfam Ankyrin repeat 71 102 IPR002110 GO:0005515
Spst7g01006 204 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01006 64 187 Ion Channels AT2G25600 31.757 3.94e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01006 - - gmx:100804303 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g01006 7 17791940 17793976 Spst7g01006 7 17791940 17793976 ECH