Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00984 ATGGATTCTGCAGTAACCCTTCCCTCCCATTCCCAAAATCACACCTCCAGTCCACAGCAAGTCCGCATCAACGGCTTTCTTGTCTATACTCGCCGTAAGCGCTCTCTCCATTCCGCCAATGATGCCGCTAAGAGACTCAAAACTGAAGAAATTAAATCCGAAGCAGCTCTAGACGCCGTTTTCAAGCTCCCCAAGGTTGAGTCCCAAGACGGTGCCATTTTTGCGGAGAAAGATTTAACTAAGGCAGAATTGAATACCAAGAAAGAGATCGTCATGGTCAACAAGAAGCCCGTCACCGTCAAGGAACTATTCGAAACTGGTCTACTCGAAGGGATTCCAGTAGTTTACGTTGGTTGCAAGAAGGATTCAACTTCAGAATTGCGGGGTATAATTACAGATGGTGGAATCTTGTGCTCATGCCGACTGTGCAATGGATGCAAGGTTATTCCACCTTCCCAATTTGAGATTCATGCATGCAACATATATAAGAGGGCAGCACAATATATTTGCCTTGAAAATGGGAAGAGCCTGCTTGAACTGTTGAGAGCATGCAGGGCAGCTCCGCTCCATACTTTGGAGACTACCATTCAAAATTTTGATGCTTCCCTGCTTCCAATGTGGAAAGAGTGGGGCTTTTGTGTCTATCTTGCGTGGAATCAAGAAAATCTGAAAGCAGTTCTATTCATGCTGTTGGCAAAAGAGTCAGGGGCTAATAAGCTCTTGTCGATTAAGAAGAAACTATTGATGGAAGGTATTTGGGAATCAGAAGGTGATGTTAACCCTGTTTGGGATGGGATGTCTAAGAATGTTCATAGAGTTTATGATTGGTCAATTATTGTAAGCTTGTTCGCCTTCGTAGCTCTGTTCATTGTTGCTGTTGTTTGCACTCGCCACCGTTCGTACTCTTTGTCGTTCACCCTTGTTGTTGTTCATGCTCGTTATACGTTTGCCTTCATAACTTGTCCCCTCGGCCAGTATTATTCTCCCGTTCATGTTCTTGTTGTACATCTGAGTTGTGTATATCTCCTCAAACTAAGAGACACTGGAAGACGAGAACAAAGTTGGTATCAACGAATACATAAATTAATTTTTGAAGAGGATGGATTGCCTAATGGAGCTGAAGTAGCTTATTATGCTCGTGGACAGAAATTGCTTGAGGGTATCAAAACACGATCTGGAATTGTCTGTAGATGTTGCAATACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCACGCAGGAAACCTTATGCATACATCTACACATCAAATGGGGTGTCACTCCATGA 1301 0.4389 MDSAVTLPSHSQNHTSSPQQVRINGFLVYTRRKRSLHSANDAAKRLKTEEIKSEAALDAVFKLPKVESQDGAIFAEKDLTKAELNTKKEIVMVNKKPVTVKELFETGLLEGIPVVYVGCKKDSTSELRGIITDGGILCSCRLCNGCKVIPPSQFEIHACNIYKRAAQYICLENGKSLLELLRACRAAPLHTLETTIQNFDASLLPMWKEWGFCVYLAWNQENLKAVLFMLLAKESGANKLLSIKKKLLMEGIWESEGDVNPVWDGMSKNVHRVYDWSIIVSLFAFVALFIVAVVCTRHRSYSLSFTLVVVHARYTFAFITCPLGQYYSPVHVLVVHLSCVYLLKLRDTGRREQSWYQRIHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRSGIVCRCCNTEISPSQFEVHAGWASRRKPYAYIYTSNGVSLH 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00984 433 PANTHER AUTOIMMUNE REGULATOR 357 433 - -
Spst7g00984 433 Pfam Tify domain binding domain 129 184 IPR032308 -
Spst7g00984 433 Pfam Tify domain binding domain 388 433 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00984 Spst-Chr7 16880065 16887381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00984 357 433 PHD Transcription Factor Family AT2G36720 70.130 2.21e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00984 - - gmx:100798276 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00984 7 16880065 16887381 Spst7g00984 7 16880065 16887381 ECH
Spst1g02828 1 36807208 36815298 Spst7g00984 7 16880065 16887381 PCT