Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00976 ATGCTGTTGCCTCCCTGGCTTGAGCCACTCCTAACCACACCCTTTTTCAATGTGTGCCGGGTTCACCGAGATGCTGCCAGGAGCGAATGTAACATGTTTTGTTTGGATTGTAACGAGGATGCGTTTTGCTTTTATTGCCGTTCCTCGCGACATAAAGATCACCAAGTGATTCAGATAAGGCGATCTTCGTATCACGATGTAGTGAGGGTGTCGGAAATTCAGAAATTGTTGGACATTAGTGGAGTTCAAACCTATGTGATCAACAGTGCCAGAGTTTTGTTTCTGAACGAGAGGCCTCAACCAAAGTCTGGAAAAGGTGTTGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTAGGTTCTGTTCTTTGGGGTGTAAGGTTGTGGGAATAAAGAGAAACGGGGATACCAAAAATGAGGCATCAACAATGGAGGGTATGTCAAAGAGATTGGTTTCTTCAAGACACGAGCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTTCTCCACCTGCTTCAAACACAAGGAGGAGAAAAGGCATTCCTCATAGGGCACCTTTTGGCTCCTAA 600 0.46 MLLPPWLEPLLTTPFFNVCRVHRDAARSECNMFCLDCNEDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKLLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKVVGIKRNGDTKNEASTMEGMSKRLVSSRHEQEEELREGSQQDMYPATPSPPASNTRRRKGIPHRAPFGS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00976 199 SUPERFAMILY B-box zinc-binding domain 16 61 - -
Spst7g00976 199 MobiDBLite consensus disorder prediction 140 199 - -
Spst7g00976 199 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 197 - -
Spst7g00976 199 MobiDBLite consensus disorder prediction 153 169 - -
Spst7g00976 199 Gene3D Classic Zinc Finger 14 79 - -
Spst7g00976 199 Pfam PLATZ transcription factor 60 131 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00976 Spst-Chr7 16520516 16521687 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Spst7g00976 PLATZ 4.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00976 - - gmx:100809455 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02824 1 36755794 36756972 Spst7g00976 7 16520516 16521687 PCT