Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00955 ATGAGTCTTTGTTTCCGACAAGAGGCTAGTAAGTATGTGATGTTGTTATCATGGGACAAGAGAAAGGAGTTGAGAGATGCAGAAGTAGAAGTTGGATTCTACAATGACCTTTGTCTCACCTATCTCTGTCACCATTTTGGGGCCGAAAGAAAGGTCTTCCTTATCGCTCCAACCTCTGCTTTTATTTGTAGCAAAAGATCCCGATTTCATGCAAGGAAGCAACAGATAGATCTAGAGACAGGAGAGGTGAAAATAAAGATTGGAGCTGGAGTGGAAGTTAAAGGGAAGAGAGACAAGAAAACAAGTCCAGACATGGAGTGGAATGGGAGCACAAGAAGTTATGTTCCTCGAGCAGAGTCTTCCTTCAGCTTCCTTTACAACTACAACTATACCCCATATCCAGGAATGGAAGTGAAGCCACACAGTCTAGCAGAGTCAAGTTCATCCATGGAAAAAATGAACTGCGGGAACCAGGAGAAGAAGAAGAGATTAACAAGTGACCAGTTAGATTCGTTGGAGAGTAGTTTCCAGAAGGAGATAAAGCTAGACCCTGATAGAAAGATGAAGCTTTCCAAGGAGTTAGGGCTTCAACCTCGCCAAATTGCTGTTTGGTTCCAAAATAGGCGTGCAAGGTGGAAGAACAAGCAACTTGAACACTTGTACGATTCACTTAAACAGGAATTTGATGCTGTATCCAAGGAAAAACAGAAGCTAGAGGAAGAGGTAATGAAGTTGAAGGGTATGCTGAGAGAGCAAGCTTCTAGAACTCAAGTGTCAACAGGTTACACAGAAATCTCTGGGGAAGAAACTGTAGAAAGCACGTCAGAGGCTCTGCGTAGCTCCAAACGGAGAACACTGCAGCAGCAGCAGCATCAGAATATGGGAGAAGGAAACTGTTCTTTCACCTTGGAAGATTACAACACAGTTCCAGTACTACCCTACTGGCCTGGGATCTCCTACTATCCCTAA 969 0.4376 MSLCFRQEASKYVMLLSWDKRKELRDAEVEVGFYNDLCLTYLCHHFGAERKVFLIAPTSAFICSKRSRFHARKQQIDLETGEVKIKIGAGVEVKGKRDKKTSPDMEWNGSTRSYVPRAESSFSFLYNYNYTPYPGMEVKPHSLAESSSSMEKMNCGNQEKKKRLTSDQLDSLESSFQKEIKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKNKQLEHLYDSLKQEFDAVSKEKQKLEEEVMKLKGMLREQASRTQVSTGYTEISGEETVESTSEALRSSKRRTLQQQQHQNMGEGNCSFTLEDYNTVPVLPYWPGISYYP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00955 322 ProSitePatterns 'Homeobox' domain signature. 190 213 IPR017970 GO:0000981|GO:0006355
Spst7g00955 322 Coils Coil 207 255 - -
Spst7g00955 322 ProSiteProfiles 'Homeobox' domain profile. 155 215 IPR001356 GO:0003677
Spst7g00955 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 149 290 IPR045224 GO:0003700
Spst7g00955 322 PRINTS Lambda-repressor HTH signature 186 195 IPR000047 GO:0003677
Spst7g00955 322 PRINTS Lambda-repressor HTH signature 195 211 IPR000047 GO:0003677
Spst7g00955 322 CDD homeodomain 160 216 IPR001356 GO:0003677
Spst7g00955 322 Gene3D - 153 220 - -
Spst7g00955 322 SMART HOX_1 158 219 IPR001356 GO:0003677
Spst7g00955 322 MobiDBLite consensus disorder prediction 257 293 - -
Spst7g00955 322 Pfam Homeodomain 160 214 IPR001356 GO:0003677
Spst7g00955 322 Pfam Homeobox associated leucine zipper 215 249 IPR003106 GO:0006355|GO:0043565
Spst7g00955 322 FunFam Putative homeobox-leucine zipper protein ATHB-51 157 220 - -
Spst7g00955 322 SUPERFAMILY Homeodomain-like 140 217 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00955 Spst-Chr7 16062702 16066227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00955 105 245 Homeobox Transcription Factor Family AT5G03790 53.086 4.73e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Spst7g00955 Homeodomain 8.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00955 - - gmx:100778007 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00955 7 16062702 16066227 Spst7g00955 7 16062702 16066227 ECH