Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00952 ATGGAACCCAATGGACTAGGCGGTGGAATGTTCTCTGGGTTGGTAGGAGTGGAGAACTCTTTGCAATCTGAGCAACAACAAAACCCTCACCACTTGCAACACCATCCCCAAATGCTTCCCTATGCCCCACACCATGGCACTGATCCACATCATCCACACCATAATCAATCGATTAAACAAGGGTACCCTGCCTATTCTTCGGCCAAGACCAAACAACAGCAACAAAGTGTCCTCAGTGATGATGATGATGACACCTCGGACGCCAAGAGGAAGATCTCGCCGTGGCAAAGAATGAAGTGGACCGACACCATGGTGAGGCTTCTGATAATGGCGGTTTATTACATTGGTGATGAGGCTGGCTCTGAAGGGACTGATAAGAAGAAGTCCTCGGGTTTAATGCAGAAGAAAGGGAAATGGAAGTCGGTCTCAAAGGCTATGATGGAGAAGGGGTTCTATGTCTCTCCCCAGCAGTGTGAGGATAAGTTCAATGACTTGAATAAGAGGTATAAGAGGGTGAATGATATTCTTGGCAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAATTTGTTGGAAACGATGGACTTGTCACCAAAGATGAAAGAGGAGGTTAAGAAGTTACTCAATTCCAAGCATTTGTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGTCATGGAAATAACACTGCTCCACAGCAAGGAGAGACTGGGGGTGAGGTATCTCAGTCTCCCGCTCAACCACAGCAACAGCAGCAACAACAACGTTGTTTTCATTCATCGGAAGTGGGGAATTTGGGGGGTTCTGGGGTAGAGGGTTTGAGGATGTTGAAAATGGGAAGTGGAGAAGAGAATGGTGATGATTCGGATGAGGATGATGAGTCCGAGGAAGACTCGGATGAGGATGAAAATGATTCAGGAGAAGGTGGTTCAAAGGGTAATGTGGGACATGGACACGAGGATATTGAGGATGATAATGATGGAAGGTCAACGAGGAAGAGGGCAAGGAAAGTTAGGGGGGTTCCTGTGTCACCACAGATGATGCAGCAACTGAGTGCTGAGGTGAGTGGTGTGTTACAAGATGGCGGTAGGAGTGCTTGGGACAAGAAGCAATGGATGAGGAGCAGGATAATACAGTTGGAGGAGCAGCAATTAAGCTATCAAACTCAATCGTATGAGTTGGAGAAACAAAGGTTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAGATGGAGAGAGCGAAACTTGAAAATGAACGAAGGAGGCTTGAGAATGAGAGAATGGTTTTACTCATTCGCCAGAAAGAACTTGAACTGATGAGTATTCAACACCAACAGCAGCATCAACAACAACATTCTTCCACATAG 1374 0.4643 MEPNGLGGGMFSGLVGVENSLQSEQQQNPHHLQHHPQMLPYAPHHGTDPHHPHHNQSIKQGYPAYSSAKTKQQQQSVLSDDDDDTSDAKRKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDKKKSSGLMQKKGKWKSVSKAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLETMDLSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHGNNTAPQQGETGGEVSQSPAQPQQQQQQQRCFHSSEVGNLGGSGVEGLRMLKMGSGEENGDDSDEDDESEEDSDEDENDSGEGGSKGNVGHGHEDIEDDNDGRSTRKRARKVRGVPVSPQMMQQLSAEVSGVLQDGGRSAWDKKQWMRSRIIQLEEQQLSYQTQSYELEKQRLKWARFSSKKEREMERAKLENERRRLENERMVLLIRQKELELMSIQHQQQHQQQHSST 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00952 457 MobiDBLite consensus disorder prediction 59 75 - -
Spst7g00952 457 MobiDBLite consensus disorder prediction 286 306 - -
Spst7g00952 457 Coils Coil 406 435 - -
Spst7g00952 457 PANTHER F16F4.11 PROTEIN-RELATED 8 446 - -
Spst7g00952 457 MobiDBLite consensus disorder prediction 230 346 - -
Spst7g00952 457 Pfam Myb/SANT-like DNA-binding domain 97 220 IPR044822 -
Spst7g00952 457 Gene3D - 100 171 - -
Spst7g00952 457 MobiDBLite consensus disorder prediction 315 333 - -
Spst7g00952 457 MobiDBLite consensus disorder prediction 230 263 - -
Spst7g00952 457 MobiDBLite consensus disorder prediction 22 90 - -
Spst7g00952 457 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00952 Spst-Chr7 16021580 16022953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst7g00952 Myb_DNA-bind_4 1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00952 - - gmx:100816661 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00952 7 16021580 16022953 Spst7g00952 7 16021580 16022953 ECH