Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00949 ATGGCCTCTTGCGACGACGACGACGACTTTTCTCTCCTCCGTGACGACAACCACCACCTCCATCAATCCTACGCGCCGCACCACCACTTCTCCCCCGCCGCCGTCGCCGTCGCCCCCGTCCCGCCCAAACCCGTCGCCGACGATGCTGAGGACTATGGAAACCCCTTCGACGACGACGGCGGCAGCGAGAAACGGAAGGACCGCGAGGAGATCGGTGAGGGAGCCACGTCTTACGGATTCAACAAGAGATCTAAGGCTCCGCCGTCGAGCACCGGCAGCGCCGAGTACCGGAAGGACAGGGAAGAGTGGAGTGACACGGCAATCGTGTGCCTCCTCGACGTGTACACGGATAAGTTCACACAGCTGAATCGGGGAAACCTGAGAGGAAGGGATTGGGAGGATGTTGCGTTGCTGGTGAGCCAACGGTGCGATAACCAATCGAAGAGCGTGGAACAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACATAGGATGAGCAGTGGCTGCATTTCCACCAGTCACTGGCCTTGGTTCAAGCAATTGGAACAGATCGTCGGGAATTCTCTTCCGGCGAAGTTCTCCGATGAGGATAAAGCGGTTGTTTCTGCTGGAACTTCGCCCAGGCAATCAAAGAGATATGGAGTGGCCACACCCAGCACTGGAGGTCAAGTGAATAACATAAGGTCGAAAGCACTGACAAACCTTAGATGGCGGAGGGTAGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAACGTTGACCCTAAGGTGGCTATGTTAGTTTCAAGAGAAGTTGGCATAGCTTCCCGCCTTGGTGTCGAGGTGGCGATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGATGCATGGGTAAATGGTTTAGAAAGATGTACCGCATACCAAGTTGGCATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCGACTCTGGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATCAGTTTTGGTGCTGGCAATCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCAGTCCTCAAGGGTACTAACGTAGATGGTGTGTATGACCGCAACTCAAGAGATAACAACTTCACTTTTGAGCATATATCCTTCAGAGAGCTAGGTTCAAGAGGCGTCACCTCTATGAATATGTCCGCTCTGACATTCTGTGAGGAAAATGCCATTCCTGTTGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCTAAAGCTTTATGTGGAGAACAAGTTGGCACACTAATTGACCAAACTGGAGCAATAAGCTAA 1443 0.5052 MASCDDDDDFSLLRDDNHHLHQSYAPHHHFSPAAVAVAPVPPKPVADDAEDYGNPFDDDGGSEKRKDREEIGEGATSYGFNKRSKAPPSSTGSAEYRKDREEWSDTAIVCLLDVYTDKFTQLNRGNLRGRDWEDVALLVSQRCDNQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFSDEDKAVVSAGTSPRQSKRYGVATPSTGGQVNNIRSKALTNLRWRRVVFKISGAALTGSDTCNVDPKVAMLVSREVGIASRLGVEVAIVVGGRNFFSGDAWVNGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDRNSRDNNFTFEHISFRELGSRGVTSMNMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00949 480 MobiDBLite consensus disorder prediction 57 73 - -
Spst7g00949 480 Hamap Uridylate kinase [pyrH]. 241 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
Spst7g00949 480 FunFam Uridylate kinase isoform A 235 479 - -
Spst7g00949 480 PANTHER URIDYLATE KINASE 96 479 - -
Spst7g00949 480 Coils Coil 143 170 - -
Spst7g00949 480 CDD AAK_UMPK-PyrH-Ec 244 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
Spst7g00949 480 MobiDBLite consensus disorder prediction 35 98 - -
Spst7g00949 480 Pfam Amino acid kinase family 245 453 IPR001048 -
Spst7g00949 480 Gene3D - 103 166 - -
Spst7g00949 480 Gene3D - 238 474 IPR036393 -
Spst7g00949 480 FunFam Aspartate/glutamate/uridylate kinase family protein 103 166 - -
Spst7g00949 480 Pfam Myb/SANT-like DNA-binding domain 100 190 IPR044822 -
Spst7g00949 480 SUPERFAMILY Carbamate kinase-like 242 473 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00949 Spst-Chr7 16002533 16007150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00949 103 194 Trihelix Transcription Factor Family AT3G14180 37.234 7.77e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst7g00949 AA_kinase 4.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00949 - - gmx:100805459 819.69