Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00948 ATGAACGAGGTTCGTTTTCATCATCTTCATCCCACGATGATGAAGCATCACCATGTCTTGTTCCTGTTGTTTTTATTTTTCTTACCGTTTTTCACGTTCAGTCTCCACCACAATGATACTCATGCACTCACCCTCTTCCGCCGCCAAAGCGACCTTCATGGCTACCTTCTTTCCAACTGGACCGGCGGCGATGCCTGCGCCGCCAAGTGGCGCGGCGTCCTCTGCTCCCCGAACGGCCGTGTCACTGTCCTTTCCCTCCCTTCCCTCAACCTCCGCGGCCCCCTCGACCCTCTCACTCCCCTCACCCACCTCCGCCTCCTCGACCTCCATGACAACCGCTTGAACGGCACTGTTTCGCCGCTCCTCTCTAACTGCACCAACCTCCGACTCCTCTACCTCGCCGGCAACGACTTATCGGGCGAGATCCCGCCAGAGGTGTCCTCCCTCAAATCCCTCCTCCGCCTCGACCTCTCCGACAATAACATTCGCGGCAAAGTTGACTTTCTCTTTAACTTAACTCAAATCATCACACTGAGACTCCAAAACAACCTTCTTTCCGGTGAAATCCCTGACCTAACTTCCTCCATGCAAAACCTCAGAGAACTCAACATGACAAACAACGCCTTCTACGGTCGTTTACCAAACGCCATGCTCAAGAAATTCGGTGTCACTACCTTCTCAGGTAACGAGGGTTTATGTGGTGCAACACCATTACCAGTTTGTTCCTTCATTACAAACCCTCCTGATGATAATAGTAATAACAATGACAATGCACCGTCTCAGACGGTTCCTTCAAACCCAAGTTCCTTCCCTGAGACCAGCGTAATAGCTCGACCAGGGAAGGAGCATCACAAGGGTTTAAGTCCCGGTGCCATTGTGGCGATTGTTGTGGGGAATTGTGTGGCGTTGCTTGTGATGACATCATTTCTGGTGGCGCATTGTTGCGCGAGGGGTAGAGGGTCTAGTTTGGTGGGGAGTGGGGAGAGTTATGGGAAGAGGAAGAGTGGGAGCAGTTACAATGGGAGCGAGAAGAAGGTGTATGGAAGTGGGGGTGGTGAGAGTGATGGGACGAGTGGAACTGATAGAAGTAGGCTTGTGTTTTTTGATCGGAGGAGTGAGTTTGAGTTGGAGGATCTACTGCGAGCGTCAGCGGAGATGCTTGGGAAGGGGAGTTTGGGGACGGTTTACAGGGCGGTGCTTGACGATGGGTGCACAGTGGCGGTGAAGAGGTTGAAGGATGCGAACCCTTGCGCCAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAGCACCCCAATGTTGTGAGACTCAAAGCCTATTACTATGCCAAGGAGGAAAAGCTTCTGGTCTACGATTATCTCTCCAATGGAAGCTTGCATTCTCTTCTTCATGGGAACCGTGGTCCGGGGAGAATTCCGTTGGATTGGACGACAAGAATAAGCCTGGTGTTAGGAGCAGCGAGAGGTCTTGCCAAGATCCACGCGGAGTACAGTGCAGCCAAAGTGCCTCACGGGAACGTGAAATCTTCGAACGTGCTTCTGGACAAGAACGGCGTGGCGTGCATATCGGACTTCGGGTTATCACTTCTCTTGAACCCGGTTCACGCCATTGCACGATTGGGAGGGTACAGGGCCCCCGAACAGGAACAGCAGAAGAGGCTGTCTCAGCAGGCTGACGTCTACAGCTTCGGGGTGTTGCTGTTGGAAGTTCTCACAGGAAGAGCTCCTTCGTCGCAGTACCCTTCACCGGCTCGTCCTAGAATGGAGGAAGAGGAACAGGCTGTGGTGGACCTCCCCAAATGGGTTCGCTCCGTCGTGAAGGAAGAGTGGACCGCAGAGGTGTTCGACCAGGAGCTTTTGCGCTACAAGAACATTGAAGAAGAGCTTGTGTCCATGCTGCATGTGGGGTTGTCCTGTGTGGCGGCGCAGCCGGAGAAGAGGCCAACTATGGAACAAGTAGTGAAGATGGTTGAGGAGATCAGGGTGGAGCAATCGCCTCTTGGGGAGGACTATGATGAATCGCGCAATTCGCTTTCACCTTCCATTCCCACCACTGAGGATGGTCTAGCTTAG 2082 0.5293 MNEVRFHHLHPTMMKHHHVLFLLFLFFLPFFTFSLHHNDTHALTLFRRQSDLHGYLLSNWTGGDACAAKWRGVLCSPNGRVTVLSLPSLNLRGPLDPLTPLTHLRLLDLHDNRLNGTVSPLLSNCTNLRLLYLAGNDLSGEIPPEVSSLKSLLRLDLSDNNIRGKVDFLFNLTQIITLRLQNNLLSGEIPDLTSSMQNLRELNMTNNAFYGRLPNAMLKKFGVTTFSGNEGLCGATPLPVCSFITNPPDDNSNNNDNAPSQTVPSNPSSFPETSVIARPGKEHHKGLSPGAIVAIVVGNCVALLVMTSFLVAHCCARGRGSSLVGSGESYGKRKSGSSYNGSEKKVYGSGGGESDGTSGTDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNVVRLKAYYYAKEEKLLVYDYLSNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEQQKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPARPRMEEEEQAVVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVAAQPEKRPTMEQVVKMVEEIRVEQSPLGEDYDESRNSLSPSIPTTEDGLA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00948 693 Gene3D Ribonuclease Inhibitor 36 237 IPR032675 -
Spst7g00948 693 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Spst7g00948 693 MobiDBLite consensus disorder prediction 668 693 - -
Spst7g00948 693 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 457 672 - -
Spst7g00948 693 MobiDBLite consensus disorder prediction 244 275 - -
Spst7g00948 693 SUPERFAMILY Protein kinase-like (PK-like) 385 661 IPR011009 -
Spst7g00948 693 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 665 IPR046959 -
Spst7g00948 693 MobiDBLite consensus disorder prediction 245 273 - -
Spst7g00948 693 ProSiteProfiles Protein kinase domain profile. 381 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst7g00948 693 MobiDBLite consensus disorder prediction 322 359 - -
Spst7g00948 693 SUPERFAMILY L domain-like 36 219 - -
Spst7g00948 693 FunFam pollen receptor-like kinase 1 352 456 - -
Spst7g00948 693 Gene3D Phosphorylase Kinase; domain 1 357 456 - -
Spst7g00948 693 Gene3D Transferase(Phosphotransferase) domain 1 457 681 - -
Spst7g00948 693 Pfam Protein kinase domain 385 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00948 Spst-Chr7 15999052 16001366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00948 32 689 Receptor kinase-like Gene Family AT2G36570 68.593 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst7g00948 Pkinase 1.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00948 - - gmx:100804135 1143.26