Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g00947 ATGGCTTCTTGCATGTGGCTCAAGAGTGCTAGTGGTGGCAGCAGTGGGAAGAAACCGCGGGCGCCACCAGATGTGCCACGAGGCCACTTGGCGGTGATGGTGGGAGAAGAAGCAAAGAGAAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCCTTGCTTCAACAACTGTTAGACCAATATGAAGGCTATGGCTTCAACAAGAGTGGTCCTCTAGCTATACCTTGTGATGAGTACCTTTTCCAAGATATTATCCAGGCCCTTAGAGATGGAACATCCTCTCCCCACGTGCCCCTCAAGAAGCTCCACTTCAAGGACTCTGCGCCCTTACTTCAAGACTATGATGGCAAAGGGAGGAGCAGCAACTAA 369 0.5041 MASCMWLKSASGGSSGKKPRAPPDVPRGHLAVMVGEEAKRRFVIRADYLNHPLLQQLLDQYEGYGFNKSGPLAIPCDEYLFQDIIQALRDGTSSPHVPLKKLHFKDSAPLLQDYDGKGRSSN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g00947 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 84 IPR003676 GO:0009733
Spst7g00947 122 Pfam Auxin responsive protein 19 88 IPR003676 GO:0009733
Spst7g00947 122 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g00947 Spst-Chr7 15933294 15933662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g00947 6 94 Calmodulin-binding Proteins AT4G34750 53.333 2.02e-24 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g00947 K14488 - gmx:100777611 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst7g00947 7 15933294 15933662 Spst7g00947 7 15933294 15933662 ECH